RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 USP32Q8NFA0 1604 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 MYPNQ86TC9 1320 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 DKC1O60832 514 aaKnown RBP eCLIP9.18□□□□□ -0.942e-9■□□□□ 11.2
NHLRC3-201ENST00000379599 HSPA8P11142 646 aaKnown RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 MMP13P45452 471 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 EHHADHQ08426 723 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 DPYDQ12882 1025 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SULT6B1Q6IMI4 303 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 GDAP1Q8TB36 358 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 CCDC127Q96BQ5 260 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 EAF2Q96CJ1 260 aaPredicted RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SLC7A5P2Q9GIP4 190 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 DHX36Q9H2U1 1008 aaKnown RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 RNF14Q9UBS8 474 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 TRIM64CA6NLI5 447 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 SPECC1L-ADORA2AF8WAN1 911 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 O00370 1275 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 CDK4P11802 303 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 SERPINB8P50452 374 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 EXOSC10Q01780 885 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 GSTA3Q16772 222 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 CCDC153Q494R4 210 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 EEF2KMTQ96G04 330 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 MAP3K14Q99558 947 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 HNRNPABQ99729 332 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 AP1M1Q9BXS5 423 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 KCNK9Q9NPC2 374 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 TRIM17Q9Y577 477 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 FADS3Q9Y5Q0 445 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 ATP7BP35670 1465 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 A0A0G2JLW4 131 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 E7EWF7 191 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 ENDOUP21128 410 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 S100A1P23297 94 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 VPS41P49754 854 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 ERFP50548 548 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 EIF3BP55884 814 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 NAA20P61599 178 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 SLC34A1Q06495 639 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 CAMK2BQ13554 666 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 WDR72Q3MJ13 1102 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 ANO5Q75V66 913 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 TMC3Q7Z5M5 1100 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 PATL1Q86TB9 770 aaKnown RBP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 HPS3Q969F9 1004 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 NACAP1Q9BZK3 213 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 MYLK2Q9H1R3 596 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 LRMDAQ9H2I8 198 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 SNRKQ9NRH2 765 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 SELENONQ9NZV5 590 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 MYH7BA7E2Y1 1941 aa9.17□□□□□ -0.94
NHLRC3-201ENST00000379599 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 CCDC169A6NNP5 214 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 BIRC5O15392 142 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 SERPINB7O75635 380 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 SKIV2L2P42285 1042 aaKnown RBP9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 KLK7P49862 253 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 PAK1Q13153 545 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 PTPROQ16827 1216 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 PDCD4Q53EL6 469 aaKnown RBP9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 KLHDC7AQ5VTJ3 777 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 B3GNT6Q6ZMB0 384 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 KIAA1683Q9H0B3 1180 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 BLZF1Q9H2G9 400 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 ADAM7Q9H2U9 754 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TRPC7Q9HCX4 862 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 SUGT1Q9Y2Z0 365 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 GNAT3A8MTJ3 354 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 FBP2O00757 339 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TPPPO94811 219 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 GJB6O95452 261 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 PABPC4LP0CB38 370 aaKnown RBP9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 MARK3P27448 753 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 ECHS1P30084 290 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 RGS2P41220 211 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 LRP8Q14114 963 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 CYTH1Q15438 398 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 RFWD3Q6PCD5 774 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 OTUD6AQ7L8S5 288 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TMC4Q7Z404 712 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 SCAIQ8N9R8 606 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 NACC2Q96BF6 587 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 MAML3Q96JK9 1138 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 TPK1Q9H3S4 243 aa9.16□□□□□ -0.94
NHLRC3-201ENST00000379599 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms