RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NSFP46459 744 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 KIF22Q14807 665 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 HAUS6Q7Z4H7 955 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 FAM49AQ9H0Q0 323 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 JPH1Q9HDC5 661 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 KCNH7Q9NS40 1196 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 PRDM4Q9UKN5 801 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 PCDHB4Q9Y5E5 795 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 BCL9LQ86UU0 1499 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 CLCN6P51797 869 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 BPIFB4P59827 614 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 LONRF2Q1L5Z9 754 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 RBM43Q6ZSC3 357 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 EXOC8Q8IYI6 725 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 HACE1Q8IYU2 909 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 MXRA8Q9BRK3 442 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 MSH4O15457 936 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 SESTD1Q86VW0 696 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 CATSPER3Q86XQ3 398 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 CCDC105Q8IYK2 499 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 UBLCP1Q8WVY7 318 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 TAAR1Q96RJ0 339 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 BEGAINQ9BUH8 593 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 MESDQ14696 234 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 SND1Q7KZF4 910 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 NLRP7Q8WX94 980 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 ASIC3Q9UHC3 531 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 UTP11Q9Y3A2 253 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 SLIT2O94813 1529 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 ICAM1P05362 532 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 CXCR5P32302 372 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 MMP19Q99542 508 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 MRIQ9BWK5 157 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 COL14A1Q05707 1796 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 KRIT1O00522 736 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 BACE1P56817 501 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 NAA35Q5VZE5 725 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 GMCL1P1Q8NEA9 526 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 RIT2Q99578 217 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 DNAJC12Q9UKB3 198 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 PCDHA13Q9Y5I0 950 aa15.4■□□□□ 0.06
SHROOM1-203ENST00000378679 ABCD1P33897 745 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 SRGAP1Q7Z6B7 1085 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 ZNF354CQ86Y25 554 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 DDX41Q9UJV9 622 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 ZNF142P52746 1687 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 CLDN3O15551 220 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 MOCS3O95396 460 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 GRB10Q13322 594 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 MTF1Q14872 753 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 MAPK6Q16659 721 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 PSPC1Q8WXF1 523 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 KCPQ6ZWJ8 1503 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 PHLPP2Q6ZVD8 1323 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 PPP1R3GB7ZBB8 358 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 FTCDO95954 541 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 TTLL4Q14679 1199 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 CEP57Q86XR8 500 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 ELOA2Q8IYF1 753 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 ANKRD13AQ8IZ07 590 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 FAM213AQ9BRX8 229 aa15.39■□□□□ 0.05
SHROOM1-203ENST00000378679 ROBO1Q9Y6N7 1651 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 A0A1W2PQC6 194 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 MYO1FO00160 1098 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 SLFN12LQ6IEE8 588 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 SAAL1Q96ER3 474 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 CEP72Q9P209 647 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 ADGRG1Q9Y653 693 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 PDXKO00764 312 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 GGPS1O95749 300 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 VIL1P09327 827 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 SNX16P57768 344 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 IVLP07476 585 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 SREBF1P36956 1147 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 FXR1P51114 621 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 NR1I3Q14994 352 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 LLGL1Q15334 1064 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 ZNF653Q96CK0 615 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 GINM1Q9NU53 330 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 ATRNO75882 1429 aa15.38■□□□□ 0.05
SHROOM1-203ENST00000378679 NFIBO00712 420 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 VCAM1P19320 739 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 STAT5BP51692 787 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 NPEPPSP55786 919 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms