RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 RUSC1Q9BVN2 902 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 SIX2Q9NPC8 291 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 KCNQ5Q9NR82 932 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
TDP2-202ENST00000378198 NENFQ9UMX5 172 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 EIF3DO15371 548 aaKnown RBP eCLIP19.88■□□□□ 0.77
TDP2-202ENST00000378198 GDF11O95390 407 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 SKOR1P84550 965 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 NFIL3Q16649 462 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 TTMPQ5BVD1 217 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 ACTRT1Q8TDG2 376 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 LMBR1Q8WVP7 490 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 INTUQ9ULD6 942 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 SCN9AQ15858 1988 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 A0A0A6YYK5 440 aaPredicted RBP19.87■□□□□ 0.77
TDP2-202ENST00000378198 KCNK3O14649 394 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 TRAF1Q13077 416 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 DNAJC21Q5F1R6 531 aaKnown RBP19.87■□□□□ 0.77
TDP2-202ENST00000378198 DACT2Q5SW24 774 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 RINT1Q6NUQ1 792 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 CD302Q8IX05 232 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 LRRC57Q8N9N7 239 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 CASKIN2Q8WXE0 1202 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 ARL8AQ96BM9 186 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 CCDC43Q96MW1 224 aaKnown RBP19.87■□□□□ 0.77
TDP2-202ENST00000378198 TUFT1Q9NNX1 390 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 LOXHD1Q8IVV2 1947 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 EML1O00423 815 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 OPLAHO14841 1288 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 TRIM66O15016 1216 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 FAM153BP0C7A2 387 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 FERP16591 822 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 CASP4P49662 377 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 FAM153CQ494X1 144 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 RBM26Q5T8P6 1007 aaKnown RBP19.87■□□□□ 0.77
TDP2-202ENST00000378198 SCFD2Q8WU76 684 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 GCNT4Q9P109 453 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 FAM153AQ9UHL3 310 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 SERPINA10Q9UK55 444 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 SYNPO2Q9UMS6 1093 aa19.87■□□□□ 0.77
TDP2-202ENST00000378198 ESYT3A0FGR9 886 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 ZSCAN5CA6NGD5 496 aaPredicted RBP19.86■□□□□ 0.77
TDP2-202ENST00000378198 CLIC2O15247 247 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 RAD51CO43502 376 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 GFPT2O94808 682 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 H2AFZP0C0S5 128 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 HOXA13P31271 388 aaPredicted RBP19.86■□□□□ 0.77
TDP2-202ENST00000378198 RNASE9P60153 205 aaKnown RBP19.86■□□□□ 0.77
TDP2-202ENST00000378198 H2AFVQ71UI9 128 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 TPCN2Q8NHX9 752 aa19.86■□□□□ 0.77
TDP2-202ENST00000378198 CALR3Q96L12 384 aaKnown RBP19.86■□□□□ 0.77
TDP2-202ENST00000378198 RBBP6Q7Z6E9 1792 aaKnown RBP19.86■□□□□ 0.77
TDP2-202ENST00000378198 MYH11P35749 1972 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 IGLV3-22A0A075B6J6 115 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 EIF3HO15372 352 aaKnown RBP eCLIP19.85■□□□□ 0.77
TDP2-202ENST00000378198 TGFB1I1O43294 461 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 PPP1R12BO60237 982 aaPredicted RBP19.85■□□□□ 0.77
TDP2-202ENST00000378198 FAM13AO94988 1023 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 PSMC2P35998 433 aaKnown RBP19.85■□□□□ 0.77
TDP2-202ENST00000378198 GNGT1P63211 74 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 CYP2W1Q8TAV3 490 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 BORCS6Q96GS4 357 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 HSD17B14Q9BPX1 270 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 PLEKHA4Q9H4M7 779 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 RGL1Q9NZL6 768 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 PCDHB13Q9Y5F0 798 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 ATRNL1Q5VV63 1379 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 SMCHD1A6NHR9 2005 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 ENTPD3O75355 529 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 STAT1P42224 750 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 NPEPPSP55786 919 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 SLFN11Q7Z7L1 901 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 KLHL7Q8IXQ5 586 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 SYCE1Q8N0S2 351 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 C1orf131Q8NDD1 294 aaKnown RBP19.85■□□□□ 0.77
TDP2-202ENST00000378198 MKNK1Q9BUB5 465 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 ISCUQ9H1K1 167 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 TAF1DQ9H5J8 278 aaPredicted RBP19.85■□□□□ 0.77
TDP2-202ENST00000378198 TMEM51Q9NW97 253 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 PRR12Q9ULL5 1215 aa19.85■□□□□ 0.77
TDP2-202ENST00000378198 CEP104O60308 925 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 CORO7P57737 925 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 C1orf186Q6ZWK4 172 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 OTOP1Q7RTM1 612 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 MYCT1Q8N699 235 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 ZFP91Q96JP5 570 aaPredicted RBP19.84■□□□□ 0.77
TDP2-202ENST00000378198 FAM107BQ9H098 131 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 AJAP1Q9UKB5 411 aaPredicted RBP19.84■□□□□ 0.77
TDP2-202ENST00000378198 GRIN2DO15399 1336 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 UBE4BO95155 1302 aa19.84■□□□□ 0.77
TDP2-202ENST00000378198 CCDC188H7C350 402 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 PGRMC1O00264 195 aaKnown RBP19.83■□□□□ 0.77
TDP2-202ENST00000378198 ECE2O60344 883 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 TRIM37O94972 964 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 GH2P01242 217 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 MUTP22033 750 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 MAGEA9P43362 315 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 KCNA1Q09470 495 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 CTTNQ14247 550 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms