RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 RRP15Q9Y3B9 282 aaKnown RBP16.24■□□□□ 0.19
NPHP4-201ENST00000378156 TXNDC9O14530 226 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 BFSP1Q12934 665 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 GEN1Q17RS7 908 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 MAGOHBQ96A72 148 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 VCX3AQ9NNX9 186 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 THAP12O43422 761 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 KCNJ6P48051 423 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 ALKBH5Q6P6C2 394 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 PALM2Q8IXS6 379 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 CCT6BQ92526 530 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 RNF14Q9UBS8 474 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 TDP2O95551 362 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 FXR1P51114 621 aaKnown RBP eCLIP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 PRELPP51888 382 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 GSPT2Q8IYD1 628 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 TC2NQ8N9U0 490 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 STXBP2Q15833 593 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 MAP7D3Q8IWC1 876 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
NPHP4-201ENST00000378156 ANKRD7Q92527 254 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 CHP1Q99653 195 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 HAUS2Q9NVX0 235 aa16.23■□□□□ 0.19
NPHP4-201ENST00000378156 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 DPYDQ12882 1025 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 RBM43Q6ZSC3 357 aaKnown RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 HPS3Q969F9 1004 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 TACO1Q9BSH4 297 aaKnown RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 NXF1Q9UBU9 619 aaKnown RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 STK38LQ9Y2H1 464 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 ABCB11O95342 1321 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 SRGAP2CP0DJJ0 459 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 MAPK4P31152 587 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 PDZD4Q76G19 769 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 RAD54LQ92698 747 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 MXD3Q9BW11 206 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 GFPT1Q06210 699 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-201ENST00000378156 FBXO33Q7Z6M2 555 aa16.22■□□□□ 0.19
NPHP4-201ENST00000378156 NR1I3Q14994 352 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 Q3C1V9 767 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 KAZNQ674X7 775 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 RPAINQ86UA6 219 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 NLRP7Q8WX94 980 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 SPZ1Q9BXG8 430 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 MTMR4Q9NYA4 1195 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 NFU1Q9UMS0 254 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PXDNQ92626 1479 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 POTEB3A0JP26 581 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 POTECB2RU33 542 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 RBBP5Q15291 538 aaKnown RBP16.21■□□□□ 0.19
NPHP4-201ENST00000378156 POTEBQ6S5H4 581 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 ZBTB33Q86T24 672 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
NPHP4-201ENST00000378156 ATP8A1Q9Y2Q0 1164 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 KRT76Q01546 638 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
NPHP4-201ENST00000378156 SPATS2LQ9NUQ6 558 aaKnown RBP16.21■□□□□ 0.19
NPHP4-201ENST00000378156 DAAM1Q9Y4D1 1078 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PALMO75781 387 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 ABL1P00519 1130 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PLTPP55058 493 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 OSTNP61366 133 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 COASYQ13057 564 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 NNTQ13423 1086 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 ARHGEF6Q15052 776 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PTPAQ15257 358 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 SLFN12LQ6IEE8 588 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PADI6Q6TGC4 694 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PROM2Q8N271 834 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 Q9H521 79 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 EFCC1Q9HA90 598 aa16.21■□□□□ 0.19
NPHP4-201ENST00000378156 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-201ENST00000378156 FLT1P17948 1338 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 MARK3P27448 753 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ANKRD40Q6AI12 368 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 PPP1R2P3Q6NXS1 205 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 RAD9BQ6WBX8 426 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms