RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 VPS16Q9H269 839 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 RTP1P59025 263 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TFDP1Q14186 410 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 MXD4Q14582 209 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 DDI1Q8WTU0 396 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 RRN3Q9NYV6 651 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TULP2O00295 520 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 KRT71Q3SY84 523 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CDK18Q07002 472 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 WASHC2DQ5SRD0 308 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 PICK1Q9NRD5 415 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 SERTAD1Q9UHV2 236 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CCPG1Q9ULG6 757 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 LSM8O95777 96 aaKnown RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 NR2C2P49116 596 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 GRIN1Q05586 938 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TRPC4APQ8TEL6 797 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 SYTL4Q96C24 671 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 A0A0D9SFI3 127 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 GIPC1O14908 333 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TMEM253P0C7T8 217 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 STX2P32856 288 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 MFSD4BQ5TF39 518 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 GUCY1B3Q02153 619 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 FAR2Q96K12 515 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 LCA5LO95447 670 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 LETM2Q2VYF4 491 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 AS3MTQ9HBK9 375 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 DNAJC12Q9UKB3 198 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CRB1P82279 1406 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 HEG1Q9ULI3 1381 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CASQ2O14958 399 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CALB2P22676 271 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 DMP1Q13316 513 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 KMT5BQ4FZB7 885 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 OSBP2Q969R2 916 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 RPS6KA3P51812 740 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 PASD1Q8IV76 773 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TMC2Q8TDI7 906 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 SCG3Q8WXD2 468 aaKnown RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 NBPF3Q9H094 633 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 VPS37BQ9H9H4 285 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 UNCXA6NJT0 531 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 DPYDQ12882 1025 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 SND1Q7KZF4 910 aaKnown RBP eCLIP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 EPS8L2Q9H6S3 715 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 LGR6Q9HBX8 967 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 GAKO14976 1311 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CYP3A7-CYP3A51PA0A087WV96 503 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TM9SF1O15321 606 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CYP3A7P24462 503 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 ZDHHC17Q8IUH5 632 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 EPAS1Q99814 870 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 RTN2O75298 545 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 KATNA1O75449 491 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 IQCKQ8N0W5 287 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TMEM45AQ9NWC5 275 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 FEM1BQ9UK73 627 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 MDM2Q00987 491 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 ZNF449Q6P9G9 518 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 FBXO38Q6PIJ6 1188 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TROAPQ12815 778 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 ASNSP08243 561 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 MAP7D1Q3KQU3 841 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 DCUN1D2Q6PH85 259 aa5.31□□□□□ -1.56
PCDH9-201ENST00000377861 CMTR1Q8N1G2 835 aaKnown RBP5.31□□□□□ -1.56
PCDH9-201ENST00000377861 MGEA5O60502 916 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ADAMTS2O95450 1211 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 JCADQ9P266 1359 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CYS1Q717R9 158 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 SLC7A3Q8WY07 619 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MAN1B1Q9UKM7 699 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 FSBPO95073 299 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ZNF174Q15697 407 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 SRPK1Q96SB4 655 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CCT8L2Q96SF2 557 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RASIP1Q5U651 963 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 DAB2IPQ5VWQ8 1189 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 EHD2Q9NZN4 543 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CHGBP05060 677 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MAPRE2Q15555 327 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CRAMP1Q96RY5 1269 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 AP1M1Q9BXS5 423 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MAGEE1Q9HCI5 957 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PPP1R9AQ9ULJ8 1098 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RASSF10A6NK89 507 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 SNX29Q8TEQ0 813 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 DCAF15Q66K64 600 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TPH2Q8IWU9 490 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 VPS39Q96JC1 886 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ASB2Q96Q27 587 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms