RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	REPS2	Q8NFH8	660 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	JPH2	Q9BR39	696 aa	Predicted RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	RUSC1	Q9BVN2	902 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	PNMA3	Q9UL41	463 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	IVNS1ABP	Q9Y6Y0	642 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	VSIG10L	Q86VR7	867 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	FAM114A1	Q8IWE2	563 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	MPHOSPH6	Q99547	160 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	MYPN	Q86TC9	1320 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	DOCK1	Q14185	1865 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	WDR64	B1ANS9	1081 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	FGFR1OP	O95684	399 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	PNMA6A	P0CW24	399 aa	Predicted RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	PLA2G4A	P47712	749 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	QARS	P47897	775 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	ADK	P55263	362 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	TCP11X2	Q5H9J9	407 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	SPECC1L	Q69YQ0	1117 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	LRRC8A	Q8IWT6	810 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	SYCP3	Q8IZU3	236 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	PPM1E	Q8WY54	764 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	MMP19	Q99542	508 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	NOC4L	Q9BVI4	516 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	NUCKS1	Q9H1E3	243 aa	Known RBP	12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	COL4A3BP	Q9Y5P4	624 aa		12.85	□□□□□ -0.35
LMO7-204	ENST00000377499	TMEM150B	A6NC51	233 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	PRPF6	O94906	941 aa	Known RBP	12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	COPB1	P53618	953 aa	Known RBP	12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	SLC12A3	P55017	1021 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	MMS22L	Q6ZRQ5	1243 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	CYFIP1	Q7L576	1253 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	CNOT6L	Q96LI5	555 aa	Known RBP	12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	HSD17B14	Q9BPX1	270 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	GABBR1	Q9UBS5	961 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499		B4DLN1	442 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	PDHX	O00330	501 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	CETP	P11597	493 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499		Q3C1V9	767 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	ODR4	Q5SWX8	454 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	SWSAP1	Q6NVH7	229 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	TMCO3	Q6UWJ1	677 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	SAMD3	Q8N6K7	520 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	DNAJC19	Q96DA6	116 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	CDHR1	Q96JP9	859 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	TXNRD2	Q9NNW7	524 aa		12.84	□□□□□ -0.35
LMO7-204	ENST00000377499	ZNF18	P17022	549 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	HOXA7	P31268	230 aa	Predicted RBP	12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	KRT76	Q01546	638 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	TSR1	Q2NL82	804 aa	Known RBP	12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	HYI	Q5T013	277 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	MFSD4B	Q5TF39	518 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	RINT1	Q6NUQ1	792 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	RIOX2	Q8IUF8	465 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	VSTM4	Q8IW00	320 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	CCDC150	Q8NCX0	1101 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	IMPACT	Q9P2X3	320 aa		12.83	□□□□□ -0.35
LMO7-204	ENST00000377499	PEX19	P40855	299 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	CLCN6	P51797	869 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	CHMP4BP1	P59074	171 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	GIT2	Q14161	759 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	ARSH	Q5FYA8	562 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PADI6	Q6TGC4	694 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	GBP6	Q6ZN66	633 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	FAM178B	Q8IXR5	827 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PAIP2	Q9BPZ3	127 aa	Known RBP	12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	MLXIP	Q9HAP2	919 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	JPH1	Q9HDC5	661 aa	Predicted RBP	12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	ADAMTS5	Q9UNA0	930 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PAXBP1	Q9Y5B6	917 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PFAS	O15067	1338 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	BCR	P11274	1271 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	ZNF157	P51786	506 aa	Predicted RBP	12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	TBC1D8B	Q0IIM8	1120 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	FKBP15	Q5T1M5	1219 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	FAM102B	Q5T8I3	360 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	TCERG1L	Q5VWI1	586 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PLA2G4F	Q68DD2	849 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	GUF1	Q8N442	669 aa	Known RBP	12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	TUBGCP2	Q9BSJ2	902 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	BCAS3	Q9H6U6	928 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	PCDHA10	Q9Y5I2	948 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	RPTOR	Q8N122	1335 aa		12.83	□□□□□ -0.36
LMO7-204	ENST00000377499	GJA5	P36382	358 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	GTF2A2	P52657	109 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	NPEPPS	P55786	919 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	ARHGAP29	Q52LW3	1261 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	AP1AR	Q63HQ0	302 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	GOLGA5	Q8TBA6	731 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	SEMA6B	Q9H3T3	888 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	PARVG	Q9HBI0	331 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	SLC9A2	Q9UBY0	812 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	CCDC169	A6NNP5	214 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	ATP2A1	O14983	1001 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	SLC25A27	O95847	323 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	YWHAB	P31946	246 aa	Known RBP	12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	JAK3	P52333	1124 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	GSC	P56915	257 aa	Predicted RBP	12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	CCNA1	P78396	465 aa		12.82	□□□□□ -0.36
LMO7-204	ENST00000377499	FSTL1	Q12841	308 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms