RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 LINC01465Q8N7H1 131 aa25.37■■□□□ 1.65
YIF1A-202ENST00000376899 ERMNQ8TAM6 284 aa25.37■■□□□ 1.65
YIF1A-202ENST00000376899 POLR3CQ9BUI4 534 aaPredicted RBP25.37■■□□□ 1.65
YIF1A-202ENST00000376899 TET1Q8NFU7 2136 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 A0A1W2PPC1 479 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 TMEM150BA6NC51 233 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 F13A1P00488 732 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 PKP1Q13835 747 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 GPNMBQ14956 572 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 RSPH3Q86UC2 560 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 TPH2Q8IWU9 490 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 DNAJB3Q8WWF6 145 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 PPME1Q9Y570 386 aa25.36■■□□□ 1.65
YIF1A-202ENST00000376899 DDX11L8A8MPP1 907 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 PFKMP08237 780 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 MUTP22033 750 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 RPA1P27694 616 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 YWHABP31946 246 aaKnown RBP25.35■■□□□ 1.65
YIF1A-202ENST00000376899 MGAT3Q09327 533 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 PTPAQ15257 358 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 HAUS3Q68CZ6 603 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 C16orf59Q7L2K0 433 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 CATSPER3Q86XQ3 398 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 FTOQ9C0B1 505 aaKnown RBP eCLIP25.35■■□□□ 1.65
YIF1A-202ENST00000376899 LRWD1Q9UFC0 647 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 CLIC4Q9Y696 253 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 STK24Q9Y6E0 443 aa25.35■■□□□ 1.65
YIF1A-202ENST00000376899 MORC2Q9Y6X9 1032 aaPredicted RBP25.35■■□□□ 1.65
YIF1A-202ENST00000376899 RSPH10B2B2RC85 870 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 MED24O75448 989 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 CXCL10P02778 98 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 RSPH10BP0C881 870 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 MBTPS1Q14703 1052 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 MTERF2Q49AM1 385 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 TMEM240Q5SV17 173 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 PLA2G4FQ68DD2 849 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 RPUSD2Q8IZ73 545 aaKnown RBP25.34■■□□□ 1.65
YIF1A-202ENST00000376899 NME8Q8N427 588 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 FAM49AQ9H0Q0 323 aaPredicted RBP25.34■■□□□ 1.65
YIF1A-202ENST00000376899 CYP26B1Q9NR63 512 aa25.34■■□□□ 1.65
YIF1A-202ENST00000376899 IGKV6-21A0A0C4DH24 114 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 NBNO60934 754 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 CTSHP09668 335 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 TBC1D8BQ0IIM8 1120 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 PSRC1Q6PGN9 363 aaPredicted RBP25.33■■□□□ 1.65
YIF1A-202ENST00000376899 OTUD6AQ7L8S5 288 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 KIAA0319LQ8IZA0 1049 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 USP28Q96RU2 1077 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 ANKEF1Q9NU02 776 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 LOXHD1Q8IVV2 1947 aa25.33■■□□□ 1.65
YIF1A-202ENST00000376899 BRD1O95696 1058 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 CHRNA1P02708 482 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 ACRP10323 421 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 XRCC6P12956 609 aaKnown RBP eCLIP25.32■■□□□ 1.64
YIF1A-202ENST00000376899 NASPP49321 788 aaPredicted RBP25.32■■□□□ 1.64
YIF1A-202ENST00000376899 MRPS6P82932 125 aaKnown RBP25.32■■□□□ 1.64
YIF1A-202ENST00000376899 TDHQ8IZJ6 230 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.32■■□□□ 1.642e-7■■■■□ 19.8
YIF1A-202ENST00000376899 SH2D3AQ9BRG2 576 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 KDM3AQ9Y4C1 1321 aa25.32■■□□□ 1.64
YIF1A-202ENST00000376899 VWA3AA6NCI4 1184 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 ZBTB39O15060 712 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 CLCN3P51790 818 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 NPEPPSP55786 919 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 C9orf50Q5SZB4 431 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 FOXD4L5Q5VV16 416 aaPredicted RBP25.31■■□□□ 1.64
YIF1A-202ENST00000376899 EFCAB12Q6NXP0 572 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 DEFB128Q7Z7B8 93 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 SNX29Q8TEQ0 813 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 FOXD4L4Q8WXT5 416 aaPredicted RBP25.31■■□□□ 1.64
YIF1A-202ENST00000376899 CEP170P1Q96L14 293 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 DHX33Q9H6R0 707 aaKnown RBP25.31■■□□□ 1.64
YIF1A-202ENST00000376899 CDY2AQ9Y6F7 541 aa25.31■■□□□ 1.64
YIF1A-202ENST00000376899 PP2D1A8MPX8 630 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 MAFO75444 373 aaPredicted RBP25.3■■□□□ 1.64
YIF1A-202ENST00000376899 CCT6AP40227 531 aaKnown RBP25.3■■□□□ 1.64
YIF1A-202ENST00000376899 SHHQ15465 462 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 ECM1Q16610 540 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 IER5Q5VY09 327 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 POTEGQ6S5H5 508 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 ZNF579Q8NAF0 562 aaKnown RBP25.3■■□□□ 1.64
YIF1A-202ENST00000376899 AK8Q96MA6 479 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 MMTAG2Q9BU76 263 aaKnown RBP25.3■■□□□ 1.64
YIF1A-202ENST00000376899 ZDHHC9Q9Y397 364 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 TRPV2Q9Y5S1 764 aa25.3■■□□□ 1.64
YIF1A-202ENST00000376899 TMOD1P28289 359 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 RFC5P40937 340 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 RARRES1P49788 294 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 XKR9Q5GH70 373 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 RASIP1Q5U651 963 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 KRT79Q5XKE5 535 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 EXOC8Q8IYI6 725 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 LRRC71Q8N4P6 559 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 METTL13Q8N6R0 699 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 ZNF396Q96N95 335 aaPredicted RBP25.29■■□□□ 1.64
YIF1A-202ENST00000376899 NACC1Q96RE7 527 aa25.29■■□□□ 1.64
YIF1A-202ENST00000376899 JPH2Q9BR39 696 aaPredicted RBP25.29■■□□□ 1.64
YIF1A-202ENST00000376899 DBR1Q9UK59 544 aaKnown RBP25.29■■□□□ 1.64
YIF1A-202ENST00000376899 FGBP02675 491 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms