RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 STAMBPL1Q96FJ0 436 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 SLC12A4Q9UP95 1085 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 KIAA1024Q9UPX6 916 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 GBP2P32456 591 aaPredicted RBP17.96■□□□□ 0.47
TRIM39-201ENST00000376656 GJB7Q6PEY0 223 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 GPBP1Q86WP2 473 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 LMBR1Q8WVP7 490 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 OSGEPQ9NPF4 335 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 DDX3XO00571 662 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 CLTAP09496 248 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 CDK8P49336 464 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 CASP5P51878 434 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 EXOC3L4Q17RC7 722 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 PIGWQ7Z7B1 504 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 HOOK3Q86VS8 718 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 U2AF1L4Q8WU68 220 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 SPDYE3A6NKU9 549 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 PLA2G4BP0C869 781 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 PRKCIP41743 596 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 TBC1D1Q86TI0 1168 aaPredicted RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 ANKS4BQ8N8V4 417 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 ZDHHC18Q9NUE0 388 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 MARCH6O60337 910 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 MMP13P45452 471 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 IFI35P80217 286 aaPredicted RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 PRPF4BQ13523 1007 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 FAM133BQ5BKY9 247 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 UBAP2Q5T6F2 1119 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 DCAF12L1Q5VU92 463 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 PNMA8AQ86V59 439 aaPredicted RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 GLG1Q92896 1179 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 RNF25Q96BH1 459 aaPredicted RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 ELAC2Q9BQ52 826 aaKnown RBP17.95■□□□□ 0.46
TRIM39-201ENST00000376656 AZI2Q9H6S1 392 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 RIOX1Q9H6W3 641 aa17.95■□□□□ 0.46
TRIM39-201ENST00000376656 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 POTECB2RU33 542 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 AFPP02771 609 aaKnown RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 LDHBP07195 334 aaKnown RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 NAA25Q14CX7 972 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 SYCE1Q8N0S2 351 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 ERVK-5Q9HDB9 667 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 A0A1B0GUA9 196 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 ASAP2O43150 1006 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 BUB1BO60566 1050 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 SIK1P57059 783 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 DCAF17Q5H9S7 520 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 DUPD1Q68J44 220 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 NEDD1Q8NHV4 660 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 ARMCX3Q9UH62 379 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-201ENST00000376656 AMFRQ9UKV5 643 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 NAV1Q8NEY1 1877 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
TRIM39-201ENST00000376656 A0A0A6YYK5 440 aaPredicted RBP17.93■□□□□ 0.46
TRIM39-201ENST00000376656 CYP11B2P19099 503 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PMS2P54278 862 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 GALCP54803 685 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 DR1Q01658 176 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 EDRF1Q3B7T1 1238 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PRMT1Q99873 361 aaKnown RBP17.93■□□□□ 0.46
TRIM39-201ENST00000376656 RAB17Q9H0T7 212 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PPP1R9AQ9ULJ8 1098 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PCDHA12Q9UN75 941 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ZNF652Q9Y2D9 606 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 L3MBTL1Q9Y468 752 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 NEBLO76041 1014 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 NUDT17P0C025 328 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PLTPP55058 493 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PTENP60484 403 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 MYO1EQ12965 1108 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ITIH4Q14624 930 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 PABPC3Q9H361 631 aaKnown RBP17.93■□□□□ 0.46
TRIM39-201ENST00000376656 SIX2Q9NPC8 291 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 AGAP1Q9UPQ3 857 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 CLGNO14967 610 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
TRIM39-201ENST00000376656 RTN2O75298 545 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 GSTA1P08263 222 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 SMARCA1P28370 1054 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 KLRC3Q07444 240 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
TRIM39-201ENST00000376656 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ERP44Q9BS26 406 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ABCF3Q9NUQ8 709 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 SNX24Q9Y343 169 aa17.93■□□□□ 0.46
TRIM39-201ENST00000376656 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 EPHA7Q15375 998 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 SPDYCQ5MJ68 293 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 SLC51AQ86UW1 340 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 LNX1Q8TBB1 728 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms