RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SMC2O95347 1197 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 MYL3P08590 195 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 CYP11B2P19099 503 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 MARK3P27448 753 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 PURAQ00577 322 aaKnown RBP25.51■■□□□ 1.67
HLA-C-202ENST00000376237 RINT1Q6NUQ1 792 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 GRAMD1CQ8IYS0 662 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 UNC93B1Q9H1C4 597 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 KIAA1468Q9P260 1216 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 TRPC6Q9Y210 931 aa25.51■■□□□ 1.67
HLA-C-202ENST00000376237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.5■■□□□ 1.67
HLA-C-202ENST00000376237 MYADML2A6NDP7 307 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 MYMKA6NI61 221 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 IRX5P78411 483 aaPredicted RBP25.5■■□□□ 1.67
HLA-C-202ENST00000376237 DPYDQ12882 1025 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 PNOCQ13519 176 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 PADI6Q6TGC4 694 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 EXOC8Q8IYI6 725 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 ARRDC4Q8NCT1 418 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 DDX12PQ92771 950 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 ARMC5Q96C12 935 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 RNPEPQ9H4A4 650 aa25.5■■□□□ 1.67
HLA-C-202ENST00000376237 CCL5P13501 91 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 NPEPPSP55786 919 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 CUL4BQ13620 913 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 TARBP2Q15633 366 aaKnown RBP25.49■■□□□ 1.67
HLA-C-202ENST00000376237 PLA2G4FQ68DD2 849 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 C1orf186Q6ZWK4 172 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 SPATA20Q8TB22 786 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 MTG1Q9BT17 334 aaPredicted RBP25.49■■□□□ 1.67
HLA-C-202ENST00000376237 TIPINQ9BVW5 301 aa25.49■■□□□ 1.67
HLA-C-202ENST00000376237 DGAT1O75907 488 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 KRT18P05783 430 aaKnown RBP25.48■■□□□ 1.67
HLA-C-202ENST00000376237 GUCY2CP25092 1073 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 ARSHQ5FYA8 562 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 ZNF484Q5JVG2 852 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 CCSAPQ6IQ19 270 aaPredicted RBP25.48■■□□□ 1.67
HLA-C-202ENST00000376237 KAT2BQ92831 832 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 SMARCE1Q969G3 411 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 ZNF333Q96JL9 665 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 GSDMAQ96QA5 445 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 TSEN34Q9BSV6 310 aaKnown RBP25.48■■□□□ 1.67
HLA-C-202ENST00000376237 RNF208Q9H0X6 261 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 BLZF1Q9H2G9 400 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 PCDHA5Q9Y5H7 936 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 MYH9P35579 1960 aaKnown RBP25.48■■□□□ 1.67
HLA-C-202ENST00000376237 COL1A2P08123 1366 aa25.48■■□□□ 1.67
HLA-C-202ENST00000376237 PVALEFA0A1B0GWK0 134 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 TMEM150BA6NC51 233 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 HAS3O00219 553 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 PRR29P0C7W0 189 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 RFC5P40937 340 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 LRRC41Q15345 812 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 MTFR1Q15390 333 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 KCNA10Q16322 511 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 MTERF2Q49AM1 385 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 NT5DC1Q5TFE4 455 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 CCDC47Q96A33 483 aaKnown RBP25.47■■□□□ 1.67
HLA-C-202ENST00000376237 TUBE1Q9UJT0 475 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 LOXHD1Q8IVV2 1947 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 CABYRO75952 493 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 SARSP49591 514 aaKnown RBP25.47■■□□□ 1.67
HLA-C-202ENST00000376237 PSEN2P49810 448 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 MFSD10Q14728 455 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 KIAA0753Q2KHM9 967 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 ZSCAN23Q3MJ62 389 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 DYMQ7RTS9 669 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 JPH2Q9BR39 696 aaPredicted RBP25.47■■□□□ 1.67
HLA-C-202ENST00000376237 RUSC1Q9BVN2 902 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 RMND1Q9NWS8 449 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 ODF2LQ9ULJ1 636 aa25.47■■□□□ 1.67
HLA-C-202ENST00000376237 MOXD2PA6NHM9 499 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 ASGR1P07306 291 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 ASIC1P78348 528 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 GIT2Q14161 759 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 MCPH1Q8NEM0 835 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 SLC7A3Q8WY07 619 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 DNAJC19Q96DA6 116 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 SH2D3AQ9BRG2 576 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 DHX33Q9H6R0 707 aaKnown RBP25.46■■□□□ 1.67
HLA-C-202ENST00000376237 WDR81Q562E7 1941 aa25.46■■□□□ 1.67
HLA-C-202ENST00000376237 RRN3P2A6NIE6 340 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 USO1O60763 962 aaKnown RBP25.45■■□□□ 1.66
HLA-C-202ENST00000376237 MYCNP04198 464 aaPredicted RBP25.45■■□□□ 1.66
HLA-C-202ENST00000376237 INSRRP14616 1297 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 CASP1P29466 404 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 POLGP54098 1239 aaPredicted RBP25.45■■□□□ 1.66
HLA-C-202ENST00000376237 KCNB1Q14721 858 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 CXCL17Q6UXB2 119 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 UNC13DQ70J99 1090 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 CCDC65Q8IXS2 484 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 DEFB118Q96PH6 123 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 CEP89Q96ST8 783 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 NRCAMQ92823 1304 aa25.45■■□□□ 1.66
HLA-C-202ENST00000376237 GAS2O43903 313 aaKnown RBP25.44■■□□□ 1.66
HLA-C-202ENST00000376237 RPN1P04843 607 aaKnown RBP25.44■■□□□ 1.66
HLA-C-202ENST00000376237 TBC1D8BQ0IIM8 1120 aa25.44■■□□□ 1.66
HLA-C-202ENST00000376237 TRIML1Q8N9V2 468 aa25.44■■□□□ 1.66
HLA-C-202ENST00000376237 ERCC4Q92889 916 aaPredicted RBP25.44■■□□□ 1.66
HLA-C-202ENST00000376237 REEP2Q9BRK0 252 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms