RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ATP1A3P13637 1013 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 CYP11B2P19099 503 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 TNFAIP2Q03169 654 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 KLHL10Q6JEL2 608 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 FOXR2Q6PJQ5 311 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 NLRX1Q86UT6 975 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 NELFBQ8WX92 580 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 XPO4Q9C0E2 1151 aaKnown RBP23.49■■□□□ 1.35
HLA-C-201ENST00000376228 IFNKQ9P0W0 207 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 FRMD3A2A2Y4 597 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 C6orf222P0C671 652 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-201ENST00000376228 MYCLP12524 364 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-201ENST00000376228 VTA1Q9NP79 307 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 CTNND2Q9UQB3 1225 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 NR2E3Q9Y5X4 410 aa23.49■■□□□ 1.35
HLA-C-201ENST00000376228 WDR81Q562E7 1941 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 SMPD1P17405 629 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 STK4Q13043 487 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 ITGB3BPQ13352 177 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-201ENST00000376228 DYMQ7RTS9 669 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 ZSCAN30Q86W11 494 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 ZFP91Q96JP5 570 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-201ENST00000376228 CDHR1Q96JP9 859 aa23.48■■□□□ 1.35
HLA-C-201ENST00000376228 EDNRBP24530 442 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 CCNE1P24864 410 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 PSMC6P62333 389 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 GPBP1Q86WP2 473 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 CCDC65Q8IXS2 484 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 RDM1Q8NG50 284 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 DYDC2Q96IM9 177 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 SAMSN1Q9NSI8 373 aaKnown RBP23.47■■□□□ 1.35
HLA-C-201ENST00000376228 RGL1Q9NZL6 768 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 IMPACTQ9P2X3 320 aa23.47■■□□□ 1.35
HLA-C-201ENST00000376228 LOC102724159A0A0B4J2E5 919 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 SERPINC1P01008 464 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 STX17P56962 302 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 UBASH3AP57075 661 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 PWP2Q15269 919 aaKnown RBP23.46■■□□□ 1.35
HLA-C-201ENST00000376228 ARSHQ5FYA8 562 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 TLK2Q86UE8 772 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 DRC7Q8IY82 874 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 GUF1Q8N442 669 aaKnown RBP23.46■■□□□ 1.35
HLA-C-201ENST00000376228 KIAA0895Q8NCT3 520 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 NACC1Q96RE7 527 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 MPHOSPH6Q99547 160 aaKnown RBP23.46■■□□□ 1.35
HLA-C-201ENST00000376228 SENP7Q9BQF6 1050 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 ZMYND8Q9ULU4 1186 aaPredicted RBP23.46■■□□□ 1.35
HLA-C-201ENST00000376228 PHF24Q9UPV7 400 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 GNEQ9Y223 722 aaKnown RBP23.46■■□□□ 1.35
HLA-C-201ENST00000376228 ZKSCAN5Q9Y2L8 839 aa23.46■■□□□ 1.35
HLA-C-201ENST00000376228 BICDL2A1A5D9 508 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 ESPNB1AK53 854 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 NFASCO94856 1347 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 LYPLA2O95372 231 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 P4HBP07237 508 aaKnown RBP23.45■■□□□ 1.34
HLA-C-201ENST00000376228 SYN1P17600 705 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 CDK11BP21127 795 aaKnown RBP23.45■■□□□ 1.34
HLA-C-201ENST00000376228 SFNP31947 248 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 GJA9P57773 515 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 BEX3Q00994 111 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 KRT76Q01546 638 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 CYP4A11Q02928 519 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 SPAG1Q07617 926 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 KCNA10Q16322 511 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 MIER3Q7Z3K6 550 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 SPC24Q8NBT2 197 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 KLHDC9Q8NEP7 349 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 NOC3LQ8WTT2 800 aaKnown RBP23.45■■□□□ 1.34
HLA-C-201ENST00000376228 UPF3AQ9H1J1 476 aaKnown RBP23.45■■□□□ 1.34
HLA-C-201ENST00000376228 PANK4Q9NVE7 773 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 KCND2Q9NZV8 630 aa23.45■■□□□ 1.34
HLA-C-201ENST00000376228 A0A1W2PQ45 241 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-201ENST00000376228 A0A1W2PQY0 241 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 LRRC10BA6NIK2 292 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 ICAM3P32942 547 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 JAK3P52333 1124 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 COASYQ13057 564 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 CTTNQ14247 550 aaKnown RBP23.44■■□□□ 1.34
HLA-C-201ENST00000376228 IQSEC1Q6DN90 963 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 CENPPQ6IPU0 288 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 CCSAPQ6IQ19 270 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-201ENST00000376228 TTI2Q6NXR4 508 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 SLC39A5Q6ZMH5 540 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 P2RX5Q93086 422 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 CTAGE1Q96RT6 745 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 SPC25Q9HBM1 224 aa23.44■■□□□ 1.34
HLA-C-201ENST00000376228 DYNC1LI2O43237 492 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-201ENST00000376228 CHMP2AO43633 222 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 SSBP05455 408 aaKnown RBP eCLIP23.43■■□□□ 1.34
HLA-C-201ENST00000376228 IDEP14735 1019 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 ACLYP53396 1101 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 RTP1P59025 263 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 GIT2Q14161 759 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 TPD52L1Q16890 204 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-201ENST00000376228 GNPTABQ3T906 1256 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 GNASQ5JWF2 1037 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 ZNF746Q6NUN9 644 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-201ENST00000376228 APTXQ7Z2E3 356 aaKnown RBP23.43■■□□□ 1.34
HLA-C-201ENST00000376228 TPH2Q8IWU9 490 aa23.43■■□□□ 1.34
HLA-C-201ENST00000376228 ATP11BQ9Y2G3 1177 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms