RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ST5P78524 1137 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 KDSRQ06136 332 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 MZT2BQ6NZ67 158 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 C1orf228Q6PIY5 440 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 SHC3Q92529 594 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 OSBP2Q969R2 916 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 DHX58Q96C10 678 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 RADILQ96JH8 1075 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 FAM167AQ96KS9 214 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 TUBA1CQ9BQE3 449 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 CCDC106Q9BWC9 280 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 WNT5BQ9H1J7 359 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 SMARCAD1Q9H4L7 1026 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 MOCS1Q9NZB8 636 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 HMGXB4Q9UGU5 601 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 MYPNQ86TC9 1320 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ANO9A1A5B4 782 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 VSTM5A8MXK1 200 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PI4K2BG5E9Z4 385 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 SEC31AO94979 1220 aaKnown RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 HEXBP07686 556 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 MAPK1P28482 360 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PLCD1P51178 756 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 RUNX1T1Q06455 604 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PI16Q6UXB8 463 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 B4GALNT4Q76KP1 1039 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 LSMEM1Q8N8F7 131 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ZPBPQ9BS86 351 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 TRIM5Q9C035 493 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 CLK4Q9HAZ1 481 aaKnown RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 MCM9Q9NXL9 1143 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 WDR35Q9P2L0 1181 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ACEP12821 1306 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ARHGAP10A1A4S6 786 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 HOXC11O43248 304 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 PTGS2P35354 604 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 GNL1P36915 607 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 TGFB2P61812 414 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ATP2B2Q01814 1243 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 C15orf59Q2T9L4 293 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 CFAP157Q5JU67 520 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 RUFY3Q7L099 469 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 MAMDC2Q7Z304 686 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 DPF3Q92784 378 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 ZKSCAN4Q969J2 545 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PHACTR3Q96KR7 559 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 HNRNPABQ99729 332 aaKnown RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 YIPF3Q9GZM5 350 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 KIAA1683Q9H0B3 1180 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
USP48-203ENST00000374732 MIS18AQ9NYP9 233 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP48-203ENST00000374732 DPP7Q9UHL4 492 aa8.62□□□□□ -1.03
USP48-203ENST00000374732 PSDA5PKW4 1024 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 FAM155AB1AL88 458 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 FGRP09769 529 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 STK38Q15208 465 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ATP13A4Q4VNC1 1196 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ANGPTL8Q6UXH0 198 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ANKRD35Q8N283 1001 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ARRDC4Q8NCT1 418 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ZNF397Q8NF99 534 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 INTS12Q96CB8 462 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 RRN3Q9NYV6 651 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 FNIP2Q9P278 1114 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 LMO7Q8WWI1 1683 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 SERTM1A2A2V5 107 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 J3KRW8 73 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 CHUKO15111 745 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 RIPK2O43353 540 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ATP5BP06576 529 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 GTF2A2P52657 109 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 RACK1P63244 317 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 BNC2Q6ZN30 1099 aaPredicted RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 ATXN2LQ8WWM7 1075 aaKnown RBP8.61□□□□□ -1.03
USP48-203ENST00000374732 WDR24Q96S15 920 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 ADNPQ9H2P0 1102 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 STIM2Q9P246 746 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 CFL2Q9Y281 166 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 DGKBQ9Y6T7 804 aa8.61□□□□□ -1.03
USP48-203ENST00000374732 CAPN14A8MX76 684 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 CETN3O15182 167 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms