RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 NOD1Q9Y239 953 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 TANC1Q9C0D5 1861 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 LTBP2Q14767 1821 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 C22orf31O95567 290 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 UBA7P41226 1012 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-201ENST00000374673 PLA2G4FQ68DD2 849 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 MTHFD1LQ6UB35 978 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
HSPG2-201ENST00000374673 PCDHA7Q9UN72 937 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 KIAA1024Q9UPX6 916 aa16.78■□□□□ 0.28
HSPG2-201ENST00000374673 ZBTB39O15060 712 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 KIAA0355O15063 1070 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 MAGEB2O15479 319 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 CYP2C9P11712 490 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 KLRC1P26715 233 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 ME1P48163 572 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 RARRES1P49788 294 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 RBL2Q08999 1139 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 GRB10Q13322 594 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 TAF2Q6P1X5 1199 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 CAGE1Q8TC20 777 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 PIGOQ8TEQ8 1089 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 DHX38Q92620 1227 aaKnown RBP16.77■□□□□ 0.28
HSPG2-201ENST00000374673 SYMPKQ92797 1274 aaKnown RBP16.77■□□□□ 0.28
HSPG2-201ENST00000374673 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 EPSTI1Q96J88 318 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 CEP170P1Q96L14 293 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 DDX19AQ9NUU7 478 aaKnown RBP16.77■□□□□ 0.28
HSPG2-201ENST00000374673 TMEM39AQ9NV64 488 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 PCDHA2Q9Y5H9 948 aa16.77■□□□□ 0.28
HSPG2-201ENST00000374673 SMIM35A0A1B0GVV1 85 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 RPLP2P05387 115 aaKnown RBP16.76■□□□□ 0.27
HSPG2-201ENST00000374673 TXLNAP40222 546 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 NPEPPSP55786 919 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-201ENST00000374673 TBC1D8BQ0IIM8 1120 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
HSPG2-201ENST00000374673 USP49Q70CQ1 688 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 RPAINQ86UA6 219 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 CCDC155Q8N6L0 562 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 WNT8BQ93098 351 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 CDK5RAP3Q96JB5 506 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 SH2D3AQ9BRG2 576 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 NOC4LQ9BVI4 516 aaKnown RBP16.76■□□□□ 0.27
HSPG2-201ENST00000374673 NR2E3Q9Y5X4 410 aa16.76■□□□□ 0.27
HSPG2-201ENST00000374673 MKI67P46013 3256 aaKnown RBP16.76■□□□□ 0.27
HSPG2-201ENST00000374673 SIP14410 1827 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 IGKV6-21A0A0C4DH24 114 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 CAND2O75155 1236 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 RFC5P40937 340 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 BFSP2Q13515 415 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 SHC4Q6S5L8 630 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 RUFY4Q6ZNE9 571 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 EXOC8Q8IYI6 725 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 RETREG2Q8NC44 543 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 HIPK3Q9H422 1215 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 PRDM5Q9NQX1 630 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-201ENST00000374673 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 DNM3Q9UQ16 869 aa16.75■□□□□ 0.27
HSPG2-201ENST00000374673 A0A087WWV3 80 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 E9PMD0 336 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 DGAT1O75907 488 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 EYA4O95677 639 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 ZRSR1Q15695 479 aaKnown RBP16.74■□□□□ 0.27
HSPG2-201ENST00000374673 ADALQ6DHV7 355 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 GDPD2Q9HCC8 539 aa16.74■□□□□ 0.27
HSPG2-201ENST00000374673 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
HSPG2-201ENST00000374673 TIMP1P01033 207 aa16.73■□□□□ 0.27
HSPG2-201ENST00000374673 CKBP12277 381 aa16.73■□□□□ 0.27
HSPG2-201ENST00000374673 RAG1P15918 1043 aa16.73■□□□□ 0.27
HSPG2-201ENST00000374673 PLCG1P19174 1290 aa16.73■□□□□ 0.27
HSPG2-201ENST00000374673 TMOD1P28289 359 aa16.73■□□□□ 0.27
HSPG2-201ENST00000374673 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms