RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 UBIAD1Q9Y5Z9 338 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 KIAA0100Q14667 2235 aaKnown RBP15.81■□□□□ 0.12
HMGA1-203ENST00000374116 SLC37A4O43826 429 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 PGK1P00558 417 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 TPM1P09493 284 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 TNFAIP2Q03169 654 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 SPAG1Q07617 926 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 GPS2Q13227 327 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 CEP55Q53EZ4 464 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 SRRTQ9BXP5 876 aaKnown RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 CWC15Q9P013 229 aaKnown RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 LIMA1Q9UHB6 759 aaKnown RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 IGLV3-22A0A075B6J6 115 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 POTEFA5A3E0 1075 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 GOLGA6L9A6NEM1 432 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 LRRC10BA6NIK2 292 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 SEPT4O43236 478 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 AKR1A1P14550 325 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 PBX1P40424 430 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 SP4Q02446 784 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 GOLGA8FQ08AF8 430 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 GOLGA8DPQ0D2H9 430 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 MTMR1Q13613 665 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 PTPN21Q16825 1174 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 PANX2Q96RD6 677 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 KCNH7Q9NS40 1196 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 FAM184BQ9ULE4 1060 aa15.8■□□□□ 0.12
HMGA1-203ENST00000374116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGA1-203ENST00000374116 AKR1B15C9JRZ8 316 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-203ENST00000374116 CYP3A4P08684 503 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 PPFIBP1Q86W92 1011 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 SCFD2Q8WU76 684 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 NELFBQ8WX92 580 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 LENG9Q96B70 501 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
HMGA1-203ENST00000374116 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGA1-203ENST00000374116 DDX20Q9UHI6 824 aaKnown RBP15.79■□□□□ 0.12
HMGA1-203ENST00000374116 PHLPP2Q6ZVD8 1323 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 LOC102724159A0A0B4J2E5 919 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 MYADML2A6NDP7 307 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 DDX39AO00148 427 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 DYNC1LI2O43237 492 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 TEX33O43247 280 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 UBA1P22314 1058 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 USP11P51784 963 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ADKP55263 362 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ETF1P62495 437 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 TTLL4Q14679 1199 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 PWP2Q15269 919 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 LHX8Q68G74 356 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 MCTP2Q6DN12 878 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 CCDC62Q6P9F0 684 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 TMCO3Q6UWJ1 677 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 SYT10Q6XYQ8 523 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 CABP7Q86V35 215 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 REXO1L1PQ8IX06 675 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ABHD8Q96I13 439 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ITIH6Q6UXX5 1313 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 MEIS1O00470 390 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 KLRC4O43908 158 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 CASQ1P31415 396 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 TECP42680 631 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 BEX3Q00994 111 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 STIM1Q13586 685 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 PDIA5Q14554 519 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ERCC6LQ2NKX8 1250 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 GNPTABQ3T906 1256 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 IQSEC1Q6DN90 963 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 CYFIP1Q7L576 1253 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 DDX25Q9UHL0 483 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 GNEQ9Y223 722 aaKnown RBP15.78■□□□□ 0.12
HMGA1-203ENST00000374116 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
HMGA1-203ENST00000374116 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.11
HMGA1-203ENST00000374116 RHOBTB3O94955 611 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 PLCG1P19174 1290 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 CIITAP33076 1130 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 PRCPP42785 496 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 KRT31Q15323 416 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 CALCRLQ16602 461 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 DUSP28Q4G0W2 176 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 TLK2Q86UE8 772 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 GOLGA5Q8TBA6 731 aa15.77■□□□□ 0.11
HMGA1-203ENST00000374116 CCDC47Q96A33 483 aaKnown RBP15.77■□□□□ 0.11
HMGA1-203ENST00000374116 CYP3A7-CYP3A51PA0A087WV96 503 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 CCDC85CA6NKD9 419 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 MSH4O15457 936 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 STAM2O75886 525 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 GGPS1O95749 300 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms