RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 LMBRD2Q68DH5 695 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-204ENST00000373825 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
SRPK1-204ENST00000373825 RBBP8NLQ8NC74 664 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-204ENST00000373825 SCG3Q8WXD2 468 aaKnown RBP16.54■□□□□ 0.24
SRPK1-204ENST00000373825 GJA10Q969M2 543 aa16.54■□□□□ 0.24
SRPK1-204ENST00000373825 GRAMD1AQ96CP6 724 aa16.54■□□□□ 0.24
SRPK1-204ENST00000373825 CLIC5Q9NZA1 410 aa16.54■□□□□ 0.24
SRPK1-204ENST00000373825 ZNF18P17022 549 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 XRCC4Q13426 336 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 BLMHQ13867 455 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 TNIP1Q15025 636 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 STK32AQ8WU08 396 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 UTP6Q9NYH9 597 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 CATSPER2Q96P56 530 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 SLITRK6Q9H5Y7 841 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 TBC1D23Q9NUY8 699 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 PNMA3Q9UL41 463 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 NOP56O00567 594 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 KRT75O95678 551 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 SHBGP04278 402 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 CALCRLQ16602 461 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 FNBP1Q96RU3 617 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 BCAP29Q9UHQ4 241 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 FLT4P35916 1363 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 ENTPD5O75356 428 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 NR2F2P24468 414 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 EXOSC10Q01780 885 aaKnown RBP16.53■□□□□ 0.24
SRPK1-204ENST00000373825 TRPC3Q13507 836 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 RNPEPL1Q9HAU8 725 aa16.53■□□□□ 0.24
SRPK1-204ENST00000373825 GOLGA8RI6L899 631 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 PEX5P50542 639 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 MCL1Q07820 350 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 ASPHQ12797 758 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 CREG2Q8IUH2 290 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 TMEM139Q8IV31 216 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
SRPK1-204ENST00000373825 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
SRPK1-204ENST00000373825 PHACTR1Q9C0D0 580 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 COPRSQ9NQ92 184 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 PYGBP11216 843 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 ARL1P40616 181 aaPredicted RBP16.52■□□□□ 0.24
SRPK1-204ENST00000373825 MLH1P40692 756 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 WLSQ5T9L3 541 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 DISC1Q9NRI5 854 aa16.52■□□□□ 0.24
SRPK1-204ENST00000373825 B2RBV5 119 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 PODXLO00592 558 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 MT-ND3P03897 115 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 SCG2P13521 617 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 CYP2J2P51589 502 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 IFI35P80217 286 aaPredicted RBP16.52■□□□□ 0.23
SRPK1-204ENST00000373825 CNGA3Q16281 694 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 FERMT1Q9BQL6 677 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 SFI1A8K8P3 1242 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 UBE2Q2LH0YL09 131 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 PTDSS1P48651 473 aaKnown RBP16.52■□□□□ 0.23
SRPK1-204ENST00000373825 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 IRGCQ6NXR0 463 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 GRK7Q8WTQ7 553 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 SAYSD1Q9NPB0 183 aa16.52■□□□□ 0.23
SRPK1-204ENST00000373825 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 EXOC3O60645 756 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
SRPK1-204ENST00000373825 SRGNP10124 158 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 MAN1A1P33908 653 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
SRPK1-204ENST00000373825 OVGP1Q12889 678 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 CCDC89Q8N998 374 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 C9orf72Q96LT7 481 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 OR52Z1P0C646 297 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 FCER1AP12319 257 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 KLC3Q6P597 504 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 CCDC137Q6PK04 289 aaKnown RBP16.51■□□□□ 0.23
SRPK1-204ENST00000373825 TRIM67Q6ZTA4 783 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 PPP4R1Q8TF05 950 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 ABCC1P33527 1531 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 GNA14O95837 355 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 FESP07332 822 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 INHBAP08476 426 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
SRPK1-204ENST00000373825 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
SRPK1-204ENST00000373825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.51■□□□□ 0.23
SRPK1-204ENST00000373825 ASCC2Q9H1I8 757 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms