RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 EXOC7Q9UPT5 735 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 NFASCO94856 1347 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ADAMTSL1Q8N6G6 1762 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CTAGE15A4D2H0 777 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 FAM196BA6NMK8 535 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CES2O00748 559 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 TADA3O75528 432 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 AFPP02771 609 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CTAGE8P0CG41 777 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 H2AFXP16104 143 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 TCP1P17987 556 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 NR2F2P24468 414 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 QARSP47897 775 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ERVK-24P63145 666 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 COG2Q14746 738 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ECM1Q16610 540 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 GNPTABQ3T906 1256 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CCDC122Q5T0U0 273 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 SFMBT2Q5VUG0 894 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 WDR59Q6PJI9 974 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 TMCO3Q6UWJ1 677 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 RSRC2Q7L4I2 434 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 KCNK18Q7Z418 384 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CTAGE6Q86UF2 777 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CTAGE4Q8IX94 777 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ZNF280CQ8ND82 737 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 DNERQ8NFT8 737 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 LMBR1Q8WVP7 490 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 NUDT12Q9BQG2 462 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 REEP2Q9BRK0 252 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 TANGO6Q9C0B7 1094 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 BHMT2Q9H2M3 363 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ACBD3Q9H3P7 528 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 MMRN2Q9H8L6 949 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 MRPL44Q9H9J2 332 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 CNOT7Q9UIV1 285 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 FRMD4BQ9Y2L6 1034 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 PCDHAC2Q9Y5I4 1007 aa9.58□□□□□ -0.88
SNRNP40-202ENST00000373720 ZNF536O15090 1300 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 ARHGEF35A5YM69 484 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 AKR1B10O60218 316 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 CCND2P30279 289 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 PRKCIP41743 596 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 SMTNP53814 917 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 CHMP4BP1P59074 171 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 PSMC5P62195 406 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 MTMR1Q13613 665 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 RRP1BQ14684 758 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 NBPF9Q3BBW0 867 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 MAP9Q49MG5 647 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 ZNF569Q5MCW4 686 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 PDXDC1Q6P996 788 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 GBP6Q6ZN66 633 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 INTS8Q75QN2 995 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 ZNF720Q7Z2F6 126 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 FAM178BQ8IXR5 827 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 SPICE1Q8N0Z3 855 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 CHST13Q8NET6 341 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 NSUN6Q8TEA1 469 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 ATP6V0A1Q93050 837 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 SECISBP2LQ93073 1101 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 NTPCRQ9BSD7 190 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 LZTFL1Q9NQ48 299 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 KCNH7Q9NS40 1196 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 TMOD4Q9NZQ9 345 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 SAR1BQ9Y6B6 198 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 EP400Q96L91 3159 aa9.57□□□□□ -0.88
SNRNP40-202ENST00000373720 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 BRCA1P38398 1863 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 NFKBIEO00221 500 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 FLOT1O75955 427 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 FERP16591 822 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 HOXA13P31271 388 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 ARHGAP25P42331 645 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 JAG1P78504 1218 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.882e-12■■■■□ 21.4
SNRNP40-202ENST00000373720 EXOC3L4Q17RC7 722 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 GLE1Q53GS7 698 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 PPP1R2P3Q6NXS1 205 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 WDR93Q6P2C0 686 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 KCNV1Q6PIU1 500 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 RNF207Q6ZRF8 634 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 ZNF572Q7Z3I7 529 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 MIER3Q7Z3K6 550 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 VSIG10LQ86VR7 867 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 TPH2Q8IWU9 490 aa9.56□□□□□ -0.88
SNRNP40-202ENST00000373720 MYCT1Q8N699 235 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms