RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 KRT85P78386 507 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 XKR3Q5GH77 459 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 MTHFD1LQ6UB35 978 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 CEP89Q96ST8 783 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 POLR3CQ9BUI4 534 aaPredicted RBP20.73■□□□□ 0.91
CDX4-201ENST00000373514 NOC4LQ9BVI4 516 aaKnown RBP20.73■□□□□ 0.91
CDX4-201ENST00000373514 TUFT1Q9NNX1 390 aa20.73■□□□□ 0.91
CDX4-201ENST00000373514 SPTLC2O15270 562 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 PRPF40AO75400 957 aaKnown RBP20.72■□□□□ 0.91
CDX4-201ENST00000373514 YEATS4O95619 227 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 RPA1P27694 616 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 YWHABP31946 246 aaKnown RBP20.72■□□□□ 0.91
CDX4-201ENST00000373514 PTK7Q13308 1070 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 TRIM71Q2Q1W2 868 aaKnown RBP20.72■□□□□ 0.91
CDX4-201ENST00000373514 ZNF484Q5JVG2 852 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 PIGOQ8TEQ8 1089 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 HIPK3Q9H422 1215 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 NRBP2Q9NSY0 501 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 BMP2KQ9NSY1 1161 aaPredicted RBP20.72■□□□□ 0.91
CDX4-201ENST00000373514 LMBRD1Q9NUN5 540 aa20.72■□□□□ 0.91
CDX4-201ENST00000373514 KIAA0355O15063 1070 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 CYP2C18P33260 490 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 TARBP2Q15633 366 aaKnown RBP20.71■□□□□ 0.91
CDX4-201ENST00000373514 ZRSR1Q15695 479 aaKnown RBP20.71■□□□□ 0.91
CDX4-201ENST00000373514 KRT79Q5XKE5 535 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 USP49Q70CQ1 688 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 PLIN2Q99541 437 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 NIFKQ9BYG3 293 aaKnown RBP20.71■□□□□ 0.91
CDX4-201ENST00000373514 WNT8AQ9H1J5 351 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 SRPRBQ9Y5M8 271 aaKnown RBP20.71■□□□□ 0.91
CDX4-201ENST00000373514 CEP290O15078 2479 aa20.71■□□□□ 0.91
CDX4-201ENST00000373514 RRN3P2A6NIE6 340 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 H0YGN5 161 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 DKC1O60832 514 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDX4-201ENST00000373514 LYPLA2O95372 231 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 GNAT1P11488 350 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 KLRC1P26715 233 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 LONP1P36776 959 aaKnown RBP20.7■□□□□ 0.9
CDX4-201ENST00000373514 KCNK18Q7Z418 384 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 CABP7Q86V35 215 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 LRRC71Q8N4P6 559 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 KRI1Q8N9T8 703 aaKnown RBP20.7■□□□□ 0.9
CDX4-201ENST00000373514 TMEM87AQ8NBN3 555 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 PNMA5Q96PV4 448 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 FAM49AQ9H0Q0 323 aaPredicted RBP20.7■□□□□ 0.9
CDX4-201ENST00000373514 CYP26B1Q9NR63 512 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 PRKAG2Q9UGJ0 569 aa20.7■□□□□ 0.9
CDX4-201ENST00000373514 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
CDX4-201ENST00000373514 MYH11P35749 1972 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 CTSHP09668 335 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 CCL23P55773 120 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 GRB10Q13322 594 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 TET1Q8NFU7 2136 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 DNAJB3Q8WWF6 145 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 SCLYQ96I15 445 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 EPSTI1Q96J88 318 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 CEP170P1Q96L14 293 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 DDX19AQ9NUU7 478 aaKnown RBP20.69■□□□□ 0.9
CDX4-201ENST00000373514 KIAA1024Q9UPX6 916 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 NR2E3Q9Y5X4 410 aa20.69■□□□□ 0.9
CDX4-201ENST00000373514 PPP6R2O75170 966 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 RAG1P15918 1043 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 THPOP40225 353 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 CLCN3P51790 818 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 KARSQ15046 597 aaKnown RBP20.68■□□□□ 0.9
CDX4-201ENST00000373514 CSPP1Q1MSJ5 1256 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 XKR9Q5GH70 373 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 ATL3Q6DD88 541 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 LRRC15Q8TF66 581 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 SYMPKQ92797 1274 aaKnown RBP20.68■□□□□ 0.9
CDX4-201ENST00000373514 BADQ92934 168 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 AK8Q96MA6 479 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 CFAP45Q9UL16 551 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 E9PMD0 336 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 TIMP1P01033 207 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 CKBP12277 381 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 RARRES1P49788 294 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 MDM2Q00987 491 aaPredicted RBP20.68■□□□□ 0.9
CDX4-201ENST00000373514 TBC1D8BQ0IIM8 1120 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 TMEM62Q0P6H9 643 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 DRP2Q13474 957 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 ZNF618Q5T7W0 954 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
CDX4-201ENST00000373514 PPP1R16BQ96T49 567 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 SCAND2PQ9GZW5 306 aaPredicted RBP20.68■□□□□ 0.9
CDX4-201ENST00000373514 PCDHA2Q9Y5H9 948 aa20.68■□□□□ 0.9
CDX4-201ENST00000373514 KDM3AQ9Y4C1 1321 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 TMEM119Q4V9L6 283 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 TRAF7Q6Q0C0 670 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 METTL13Q8N6R0 699 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 LINC01465Q8N7H1 131 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 CAGE1Q8TC20 777 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 PCDHA7Q9UN72 937 aa20.67■□□□□ 0.9
CDX4-201ENST00000373514 TRAK2O60296 914 aa20.66■□□□□ 0.9
CDX4-201ENST00000373514 UBA7P41226 1012 aa20.66■□□□□ 0.9
CDX4-201ENST00000373514 ME1P48163 572 aa20.66■□□□□ 0.9
CDX4-201ENST00000373514 RBL2Q08999 1139 aa20.66■□□□□ 0.9
CDX4-201ENST00000373514 MKRN4PQ13434 485 aaPredicted RBP20.66■□□□□ 0.9
CDX4-201ENST00000373514 BFSP2Q13515 415 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms