RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ZNF618Q5T7W0 954 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 HAUS3Q68CZ6 603 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 TAF2Q6P1X5 1199 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 DEFB128Q7Z7B8 93 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 DYDC2Q96IM9 177 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 LXNQ9BS40 222 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 CLIC4Q9Y696 253 aa20.55■□□□□ 0.88
PBX3-205ENST00000373492 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
PBX3-205ENST00000373492 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
PBX3-205ENST00000373492 MBLAC1A4D2B0 266 aaPredicted RBP20.54■□□□□ 0.88
PBX3-205ENST00000373492 ZNF862O60290 1169 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
PBX3-205ENST00000373492 XKR3Q5GH77 459 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 TRAF7Q6Q0C0 670 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 RPAINQ86UA6 219 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 TPH2Q8IWU9 490 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 ZSWIM4Q9H7M6 989 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 TUBE1Q9UJT0 475 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
PBX3-205ENST00000373492 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 CXCL10P02778 98 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 RPLP2P05387 115 aaKnown RBP20.53■□□□□ 0.88
PBX3-205ENST00000373492 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 ACTN1P12814 892 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 NUCB2P80303 420 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 CTTNQ14247 550 aaKnown RBP20.53■□□□□ 0.88
PBX3-205ENST00000373492 MARCH8Q5T0T0 291 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 C4orf19Q8IY42 314 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
PBX3-205ENST00000373492 TUFT1Q9NNX1 390 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
PBX3-205ENST00000373492 SEPT9Q9UHD8 586 aaPredicted RBP20.53■□□□□ 0.88
PBX3-205ENST00000373492 SLITRK3O94933 977 aa20.52■□□□□ 0.88
PBX3-205ENST00000373492 GPNMBQ14956 572 aa20.52■□□□□ 0.88
PBX3-205ENST00000373492 STK38Q15208 465 aa20.52■□□□□ 0.88
PBX3-205ENST00000373492 OTUD6AQ7L8S5 288 aa20.52■□□□□ 0.88
PBX3-205ENST00000373492 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
PBX3-205ENST00000373492 POLR3CQ9BUI4 534 aaPredicted RBP20.52■□□□□ 0.88
PBX3-205ENST00000373492 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 NBNO60934 754 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 RPA1P27694 616 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 PTPAQ15257 358 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 IL17AQ16552 155 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 KRT79Q5XKE5 535 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 FAM109BQ6ICB4 259 aaPredicted RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 RSPH3Q86UC2 560 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 AK8Q96MA6 479 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 NIFKQ9BYG3 293 aaKnown RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 TFIP11Q9UBB9 837 aaKnown RBP20.51■□□□□ 0.87
PBX3-205ENST00000373492 CFAP45Q9UL16 551 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 ZDHHC9Q9Y397 364 aa20.51■□□□□ 0.87
PBX3-205ENST00000373492 BAIAP3O94812 1187 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 SLC34A2O95436 690 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 MUTP22033 750 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 KLRC1P26715 233 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 YWHABP31946 246 aaKnown RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 LONP1P36776 959 aaKnown RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 CCT6AP40227 531 aaKnown RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 SLC39A14Q15043 492 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 MTERF2Q49AM1 385 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 RUFY4Q6ZNE9 571 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 CATSPER3Q86XQ3 398 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 SNX29Q8TEQ0 813 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 TSHZ2Q9NRE2 1034 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 PCDHA2Q9Y5H9 948 aa20.5■□□□□ 0.87
PBX3-205ENST00000373492 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
PBX3-205ENST00000373492 LAMA2P24043 3122 aaKnown RBP20.49■□□□□ 0.87
PBX3-205ENST00000373492 MAGEB2O15479 319 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 MED24O75448 989 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 LYPLA2O95372 231 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 YEATS4O95619 227 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 MARCKSP29966 332 aaPredicted RBP20.49■□□□□ 0.87
PBX3-205ENST00000373492 MBTPS1Q14703 1052 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 CNKSR3Q6P9H4 555 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 ANO5Q75V66 913 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 WRAP73Q9P2S5 460 aaPredicted RBP20.49■□□□□ 0.87
PBX3-205ENST00000373492 PPME1Q9Y570 386 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 SLC4A7Q9Y6M7 1214 aa20.49■□□□□ 0.87
PBX3-205ENST00000373492 TET1Q8NFU7 2136 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 ZBTB42B2RXF5 422 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 STBD1O95210 358 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 SPATA31C1P0DKV0 1188 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 DDIT3P35638 169 aa20.48■□□□□ 0.87
PBX3-205ENST00000373492 TBC1D8BQ0IIM8 1120 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms