RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 DDTLA6NHG4 134 aaPredicted RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 KRT31Q15323 416 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 ODR4Q5SWX8 454 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 FKBP1CQ5VVH2 108 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 LDHDQ86WU2 507 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 PROM2Q8N271 834 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 PANX2Q96RD6 677 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 LSM14BQ9BX40 385 aaKnown RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 ZHX2Q9Y6X8 837 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 CASP1P29466 404 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 CASP14P31944 242 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 GMPSP49915 693 aaPredicted RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 SFSWAPQ12872 951 aaKnown RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 SPP2Q13103 211 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 RRAGAQ7L523 313 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 CERS5Q8N5B7 392 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 GBP7Q8N8V2 638 aaPredicted RBP10.91□□□□□ -0.66
KDM4A-201ENST00000372396 CCHCR1Q8TD31 782 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 FBXO40Q9UH90 709 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 NID2Q14112 1375 aa10.91□□□□□ -0.66
KDM4A-201ENST00000372396 E7EVH7 732 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 PRCPP42785 496 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 USP4Q13107 963 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 ALCAMQ13740 583 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 SH2D4BQ5SQS7 431 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 FAM102BQ5T8I3 360 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 TRIM68Q6AZZ1 485 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 ZNF365Q70YC5 407 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 MMADHCQ9H3L0 296 aaPredicted RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 TBC1D22BQ9NU19 505 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 MEIS1O00470 390 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 CTNND1O60716 968 aaKnown RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 MAGEA1P43355 309 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 JAK3P52333 1124 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 DRP2Q13474 957 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 CYB5D1Q6P9G0 228 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 APBB1IPQ7Z5R6 666 aaPredicted RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 C7orf25Q9BPX7 421 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 PARVGQ9HBI0 331 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 L1RE1Q9UN81 338 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 ZNF189O75820 626 aaPredicted RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 CLTAP09496 248 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 NR2F2P24468 414 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 ATP1A2P50993 1020 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 DNA2P51530 1060 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 SESN3P58005 492 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 CCNA1P78396 465 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 KLHL30Q0D2K2 578 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 PRPF4BQ13523 1007 aaKnown RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 KCTD2Q14681 263 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 GUF1Q8N442 669 aaKnown RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 KCTD17Q8N5Z5 321 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 SUGCTQ9HAC7 445 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 MLXIPQ9HAP2 919 aa10.9□□□□□ -0.66
KDM4A-201ENST00000372396 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
KDM4A-201ENST00000372396 C19orf81C9J6K1 198 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.67
KDM4A-201ENST00000372396 ROR2Q01974 943 aaKnown RBP10.9□□□□□ -0.67
KDM4A-201ENST00000372396 RBL2Q08999 1139 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 LRRC41Q15345 812 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 WDR44Q5JSH3 913 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 FAM160B1Q5W0V3 765 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 MOXD1Q6UVY6 613 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 ARFGAP2Q8N6H7 521 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 C17orf50Q8WW18 174 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 PLVAPQ9BX97 442 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 TMEM60Q9H2L4 133 aa10.9□□□□□ -0.67
KDM4A-201ENST00000372396 DDX20Q9UHI6 824 aaKnown RBP10.9□□□□□ -0.67
KDM4A-201ENST00000372396 COBLO75128 1261 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 BCRP11274 1271 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 GRIN1Q05586 938 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 CXCL9Q07325 125 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 DMP1Q13316 513 aaPredicted RBP10.89□□□□□ -0.67
KDM4A-201ENST00000372396 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 VIPAS39Q9H9C1 493 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 NRBP2Q9NSY0 501 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 ZNF232Q9UNY5 417 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 ITGB4P16144 1822 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 ABCA3Q99758 1704 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 KLRG2A4D1S0 409 aaPredicted RBP10.89□□□□□ -0.67
KDM4A-201ENST00000372396 CAP2P40123 477 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 MIS18BP1Q6P0N0 1132 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 CCDC13Q8IYE1 715 aa10.89□□□□□ -0.67
KDM4A-201ENST00000372396 FBXO41Q8TF61 875 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms