RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PPP6R3Q5H9R7 873 aaPredicted RBP25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 ZNF668Q96K58 619 aaPredicted RBP25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 BEGAINQ9BUH8 593 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 ZNF341Q9BYN7 854 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 PI4KBQ9UBF8 816 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 SCOCQ9UIL1 159 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP6P35125 1406 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 GCLMP48507 274 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 SLC44A5Q8NCS7 719 aa25.71■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L15C9J2P7 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L13C9JLJ4 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L11C9JVI0 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L18D6R9N7 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L22D6RA61 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L17D6RBQ6 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L19D6RCP7 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L20D6RJB6 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 OSBPP22059 807 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L24Q0WX57 530 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 C6orf118Q5T5N4 469 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP17L6PQ6QN14 398 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 THNSL1Q8IYQ7 743 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 KCNV2Q8TDN2 545 aa25.7■■□□□ 1.71
RAPGEF1-203ENST00000372195 USP14P54578 494 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 CC2D2BQ6DHV5 1058 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 ABCB11O95342 1321 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 XPAP23025 273 aaPredicted RBP25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 LIFRP42702 1097 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 TMEM259Q4ZIN3 620 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 TRIM67Q6ZTA4 783 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 CENPUQ71F23 418 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 SMYD3Q9H7B4 428 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 ROBO2Q9HCK4 1378 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 SLC27A3Q5K4L6 730 aa25.7■■□□□ 1.7
RAPGEF1-203ENST00000372195 TEX33O43247 280 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 PPFIA2O75334 1257 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 SOX5P35711 763 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 RNF14Q9UBS8 474 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 TERF2Q15554 542 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 CPSF3Q9UKF6 684 aaKnown RBP25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 HMGB1P1B2RPK0 211 aaPredicted RBP25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 XPOTO43592 962 aaKnown RBP25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 FAM83BQ5T0W9 1011 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 OR6B3Q8NGW1 331 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 CCDC138Q96M89 665 aa25.69■■□□□ 1.7
RAPGEF1-203ENST00000372195 GOLGA8CPA6NN73 597 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 YWHAHQ04917 246 aaPredicted RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 NLGN1Q8N2Q7 840 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 hCG_1984214I3L0E3 225 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 TADA3O75528 432 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 MYO1EQ12965 1108 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZNF746Q6NUN9 644 aaPredicted RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZNF713Q8N859 430 aaPredicted RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 TRAIPQ9BWF2 469 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 PITPNM3Q9BZ71 974 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 AP5M1Q9H0R1 490 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 RNF217Q8TC41 542 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 ATP7BP35670 1465 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 GH2P01242 217 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 NSUN2Q08J23 767 aaKnown RBP eCLIP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 NGRNQ9NPE2 291 aaKnown RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 NUDCD1Q96RS6 583 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 FAM49AQ9H0Q0 323 aaPredicted RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 QTRT2Q9H974 415 aaKnown RBP25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 SLC4A7Q9Y6M7 1214 aa25.68■■□□□ 1.7
RAPGEF1-203ENST00000372195 PRDX5P30044 214 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 ADCY2Q08462 1091 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 CUL1Q13616 776 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 NBPF3Q9H094 633 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 CNOT8Q9UFF9 292 aaKnown RBP25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 IQANK1A0A1B0GTG1 560 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 SEPT2Q15019 361 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 UNC13DQ70J99 1090 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 RAD54LQ92698 747 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 DYDC2Q96IM9 177 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 SPATA17Q96L03 361 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 ORC6Q9Y5N6 252 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 K7ERI5 159 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 MAPK13O15264 365 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 MAGOHP61326 146 aaKnown RBP25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 KIF19Q2TAC6 998 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 TMEM94Q12767 1356 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 COASYQ13057 564 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 GRAMD1BQ3KR37 738 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZCCHC17Q9NP64 241 aaKnown RBP25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 HEY1Q9Y5J3 304 aa25.67■■□□□ 1.7
RAPGEF1-203ENST00000372195 POTEB3A0JP26 581 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 POTECB2RU33 542 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 KIF28PB7ZC32 967 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 POTEBQ6S5H4 581 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 ACTR5Q9H9F9 607 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 MYO5CQ9NQX4 1742 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 USP17L10C9JJH3 530 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 SLC16A4O15374 487 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 CC2D1AQ6P1N0 951 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 BBS5Q8N3I7 341 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms