RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.09
LDB3-204ENST00000372066 ATP11BQ9Y2G3 1177 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 ADGRG1Q9Y653 693 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 KBTBD13C9JR72 458 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 WDR46O15213 610 aaKnown RBP15.58■□□□□ 0.08
LDB3-204ENST00000372066 SEPT4O43236 478 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 FCER1AP12319 257 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 PRKCSHP14314 528 aaPredicted RBP15.58■□□□□ 0.08
LDB3-204ENST00000372066 MTIF2P46199 727 aaKnown RBP15.58■□□□□ 0.08
LDB3-204ENST00000372066 TSR1Q2NL82 804 aaKnown RBP15.58■□□□□ 0.08
LDB3-204ENST00000372066 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 OR8K1Q8NGG5 319 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 ERGIC2Q96RQ1 377 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 CAPN11Q9UMQ6 739 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 STXBP5LQ9Y2K9 1186 aa15.58■□□□□ 0.08
LDB3-204ENST00000372066 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 SLC25A27O95847 323 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 CASQ1P31415 396 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 KRT9P35527 623 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 TUBB2AQ13885 445 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 TMEM132BQ14DG7 1078 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 RAD9BQ6WBX8 426 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 CPLX3Q8WVH0 158 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 DNAJC19Q96DA6 116 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 DNAJC7Q99615 494 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 TUBB2BQ9BVA1 445 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 RANBP17Q9H2T7 1088 aaKnown RBP15.57■□□□□ 0.08
LDB3-204ENST00000372066 SLC39A2Q9NP94 309 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 MYO1AQ9UBC5 1043 aa15.57■□□□□ 0.08
LDB3-204ENST00000372066 LUC7L2Q9Y383 392 aaKnown RBP15.57■□□□□ 0.08
LDB3-204ENST00000372066 A0A1W2PQJ5 194 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 IDEP14735 1019 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 COASYQ13057 564 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 USH1GQ495M9 461 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 FAM26FQ5R3K3 315 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 CREBRFQ8IUR6 639 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 PDCL2Q8N4E4 241 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 SEMA6BQ9H3T3 888 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
LDB3-204ENST00000372066 ZNF215Q9UL58 517 aaPredicted RBP15.56■□□□□ 0.08
LDB3-204ENST00000372066 MRPL11Q9Y3B7 192 aaKnown RBP15.56■□□□□ 0.08
LDB3-204ENST00000372066 PLA2G4BP0C869 781 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 RPA1P27694 616 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 ADCYAP1R1P41586 468 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 GNG11P61952 73 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 SPIRE1Q08AE8 756 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 MAN2A1Q16706 1144 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 DYMQ7RTS9 669 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 MYOCDQ8IZQ8 938 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 MMP19Q99542 508 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 NOC4LQ9BVI4 516 aaKnown RBP15.55■□□□□ 0.08
LDB3-204ENST00000372066 PANK4Q9NVE7 773 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
LDB3-204ENST00000372066 FRMD3A2A2Y4 597 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 B4DLN1 442 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 PES1O00541 588 aaKnown RBP15.54■□□□□ 0.08
LDB3-204ENST00000372066 KIF5CO60282 957 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 GNA14O95837 355 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 MUTP22033 750 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 STAT3P40763 770 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 TBC1D8BQ0IIM8 1120 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 PRR16Q569H4 304 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 ZNF397Q8NF99 534 aaPredicted RBP15.54■□□□□ 0.08
LDB3-204ENST00000372066 TSC1Q92574 1164 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 LENG9Q96B70 501 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 POLR3CQ9BUI4 534 aaPredicted RBP15.54■□□□□ 0.08
LDB3-204ENST00000372066 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 PRDM5Q9NQX1 630 aaPredicted RBP15.54■□□□□ 0.08
LDB3-204ENST00000372066 ADAMTS5Q9UNA0 930 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 KIAA1024Q9UPX6 916 aa15.54■□□□□ 0.08
LDB3-204ENST00000372066 TTC26A0AVF1 554 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 GCOM1H8Y6P7 765 aaPredicted RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 VWA5AO00534 786 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 OPLAHO14841 1288 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 PGK2P07205 417 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 POLR2MP0CAP2 368 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 ZBED6P86452 979 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 CDK17Q00537 523 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 KCTD2Q14681 263 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 MTF1Q14872 753 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 LRRC41Q15345 812 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 ECM1Q16610 540 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 MEA1Q16626 185 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 TRIM60Q495X7 471 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 ZNF662Q6ZS27 426 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 GPBP1Q86WP2 473 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 RIOX2Q8IUF8 465 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 DESI2Q9BSY9 194 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 ZNHIT6Q9NWK9 470 aaKnown RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 PNMA2Q9UL42 364 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 PPP1R9AQ9ULJ8 1098 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 SMCHD1A6NHR9 2005 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms