RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 NFRKBQ6P4R8 1299 aa22.58■■□□□ 1.2
VEGFA-204ENST00000372064 BORCS6Q96GS4 357 aa22.58■■□□□ 1.2
VEGFA-204ENST00000372064 ZNF341Q9BYN7 854 aa22.58■■□□□ 1.2
VEGFA-204ENST00000372064 VPS33BQ9H267 617 aa22.58■■□□□ 1.2
VEGFA-204ENST00000372064 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.58■■□□□ 1.2
VEGFA-204ENST00000372064 TSKSQ9UJT2 592 aa22.58■■□□□ 1.2
VEGFA-204ENST00000372064 EPB41P11171 864 aaKnown RBP22.57■■□□□ 1.2
VEGFA-204ENST00000372064 UCHL3P15374 230 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 NMT1P30419 496 aaKnown RBP22.57■■□□□ 1.2
VEGFA-204ENST00000372064 MAP9Q49MG5 647 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 IRF2BP2Q7Z5L9 587 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 MYCT1Q8N699 235 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 WDR11Q9BZH6 1224 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 VIPAS39Q9H9C1 493 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 A0A087X0T9 212 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 FAM228BP0C875 321 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 PTGER2P43116 358 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 ZNF131P52739 623 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 EXOC3L4Q17RC7 722 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 DCAF17Q5H9S7 520 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-204ENST00000372064 SLC35C1Q96A29 364 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 KCND2Q9NZV8 630 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 CCPG1Q9ULG6 757 aa22.57■■□□□ 1.2
VEGFA-204ENST00000372064 LRRIQ3A6PVS8 624 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-204ENST00000372064 ENOX2Q16206 610 aaKnown RBP22.56■■□□□ 1.2
VEGFA-204ENST00000372064 RUBCNQ92622 972 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 FIZ1Q96SL8 496 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 SEL1LQ9UBV2 794 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 ZNF536O15090 1300 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 UBE4BO95155 1302 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 BUB1O43683 1085 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 SPATA4Q8NEY3 305 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 PARVGQ9HBI0 331 aa22.56■■□□□ 1.2
VEGFA-204ENST00000372064 GTPBP10A4D1E9 387 aaKnown RBP22.55■■□□□ 1.2
VEGFA-204ENST00000372064 ZC2HC1CQ53FD0 456 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-204ENST00000372064 NACC1Q96RE7 527 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 MYOZ2Q9NPC6 264 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 SIX2Q9NPC8 291 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 BZW2Q9Y6E2 419 aaKnown RBP22.55■■□□□ 1.2
VEGFA-204ENST00000372064 MYH10P35580 1976 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 BTNL10A8MVZ5 291 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 HSD17B4P51659 736 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 RASA3Q14644 834 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 TCERG1LQ5VWI1 586 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 COL20A1Q9P218 1284 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 ADAMTS1Q9UHI8 967 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 PCDHGC5Q9Y5F6 944 aa22.55■■□□□ 1.2
VEGFA-204ENST00000372064 IPO5O00410 1097 aaKnown RBP22.54■■□□□ 1.2
VEGFA-204ENST00000372064 NCK2O43639 380 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 C10orf76Q5T2E6 689 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 TEKT3Q9BXF9 490 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 ODF2LQ9ULJ1 636 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 PCDHB13Q9Y5F0 798 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 PHF20L1A8MW92 1017 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 NFIBO00712 420 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 ICAM1P05362 532 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 ITGB5P18084 799 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 KLRC1P26715 233 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 DGKZQ13574 1117 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 CCNI2Q6ZMN8 369 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-204ENST00000372064 GBP6Q6ZN66 633 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 KSR1Q8IVT5 923 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 MXRA8Q9BRK3 442 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 DDX39AO00148 427 aaKnown RBP22.54■■□□□ 1.2
VEGFA-204ENST00000372064 PRKCIP41743 596 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 PTK2Q05397 1052 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 CIAPIN1Q6FI81 312 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 RIT2Q99578 217 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.54■■□□□ 1.2
VEGFA-204ENST00000372064 PKD2L1Q9P0L9 805 aa22.54■■□□□ 1.2
VEGFA-204ENST00000372064 RPTORQ8N122 1335 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 EGFRP00533 1210 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 JAM2P57087 298 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 CCDC70Q6NSX1 233 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 ZNF720Q7Z2F6 126 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 BANK1Q8NDB2 785 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 RBM46Q8TBY0 533 aaKnown RBP22.53■■□□□ 1.2
VEGFA-204ENST00000372064 HOOK2Q96ED9 719 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 LXNQ9BS40 222 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 LOXHD1Q8IVV2 1947 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 ANXA13P27216 316 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 ZNF571Q7Z3V5 609 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-204ENST00000372064 IL31RAQ8NI17 732 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 SPAG5Q96R06 1193 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 PSMB7Q99436 277 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 MKNK1Q9BUB5 465 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 ACBD3Q9H3P7 528 aa22.53■■□□□ 1.2
VEGFA-204ENST00000372064 PALMO75781 387 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 CXCR5P32302 372 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 KIAA0753Q2KHM9 967 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 CPXCR1Q8N123 301 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 RNF14Q9UBS8 474 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 ATP8B3O60423 1300 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 BCRP11274 1271 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 GUCY2CP25092 1073 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 PSMC2P35998 433 aaKnown RBP22.52■■□□□ 1.2
VEGFA-204ENST00000372064 CLEC4DQ8WXI8 215 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 PACSIN1Q9BY11 444 aa22.52■■□□□ 1.2
VEGFA-204ENST00000372064 N4BP1O75113 896 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms