RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KRT31Q15323 416 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 XKR3Q5GH77 459 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 CELF3Q5SZQ8 465 aaKnown RBP29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 CCDC62Q6P9F0 684 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 MAMDC4Q6UXC1 1216 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 NRBP1Q9UHY1 535 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 WDR81Q562E7 1941 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 USO1O60763 962 aaKnown RBP29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 STBD1O95210 358 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 BMT2Q1RMZ1 405 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 ODR4Q5SWX8 454 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 PPP4R3CPQ6ZMV5 832 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 STXBP4Q6ZWJ1 553 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 TRMT1LQ7Z2T5 733 aaKnown RBP29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 DRC1Q96MC2 740 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 POLD4Q9HCU8 107 aa29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 LARSQ9P2J5 1176 aaKnown RBP29.07■■■□□ 2.24
ATPAF1-202ENST00000371937 GSTTP1A0A1W2PQM5 241 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 EIF3DO15371 548 aaKnown RBP eCLIP29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 GCNT3O95395 438 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 TXNP10599 105 aaKnown RBP29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 TM4SF4P48230 202 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 NPEPPSP55786 919 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 MAPK7Q13164 816 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 ZCWPW2Q504Y3 356 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 FAM160B1Q5W0V3 765 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 PLA2G4FQ68DD2 849 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 C17orf99Q6UX52 265 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 TMC6Q7Z403 805 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 FILIP1Q7Z7B0 1213 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 CREBRFQ8IUR6 639 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 VSTM4Q8IW00 320 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 FAM178BQ8IXR5 827 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 CEP170P1Q96L14 293 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 INTS13Q9NVM9 706 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 TMEM150BA6NC51 233 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 CASP5P51878 434 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 NELFCDQ8IXH7 590 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 DHX37Q8IY37 1157 aaKnown RBP29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 DAW1Q8N136 415 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 ZNF507Q8TCN5 953 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 KCTD10Q9H3F6 313 aa29.06■■■□□ 2.24
ATPAF1-202ENST00000371937 MCM3APO60318 1980 aa29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 GSDMDP57764 484 aa29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 FKBP3Q00688 224 aaKnown RBP29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 KNOP1Q1ED39 458 aaKnown RBP29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 MAML3Q96JK9 1138 aa29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 RTN4Q9NQC3 1192 aaKnown RBP29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 SEPT9Q9UHD8 586 aaPredicted RBP29.05■■■□□ 2.24
ATPAF1-202ENST00000371937 NOP56O00567 594 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 MYBP10242 640 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 COPB1P53618 953 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 CCDC144BQ3MJ40 725 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 ZSCAN30Q86W11 494 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 MSL3Q8N5Y2 521 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 AFAP1L1Q8TED9 768 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 ZNF236Q9UL36 1845 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 UBE4BO95155 1302 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 N4BP3O15049 544 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 MAPTP10636 758 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 PTGS1P23219 599 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 TCF7P36402 384 aaPredicted RBP29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 ZNF720Q7Z2F6 126 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 SH2D3AQ9BRG2 576 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 CYP26B1Q9NR63 512 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 PCDHB13Q9Y5F0 798 aa29.04■■■□□ 2.24
ATPAF1-202ENST00000371937 MYH9P35579 1960 aaKnown RBP29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 DGAT1O75907 488 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 OATP04181 439 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 TPM2P07951 284 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 STAT5BP51692 787 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 EDRF1Q3B7T1 1238 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 MAEAQ7L5Y9 396 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 CNOT6LQ96LI5 555 aaKnown RBP29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 AZI2Q9H6S1 392 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 PDGFCQ9NRA1 345 aa29.03■■■□□ 2.24
ATPAF1-202ENST00000371937 RBM47A0AV96 593 aaKnown RBP29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 PDXKO00764 312 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 PRPF6O94906 941 aaKnown RBP29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 PLS3P13797 630 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 MORN1Q5T089 497 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 TAPT1Q6NXT6 567 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 PAXIP1Q6ZW49 1069 aaPredicted RBP29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 CEP63Q96MT8 703 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 SPATA33Q96N06 139 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 FIZ1Q96SL8 496 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 GPR20Q99678 358 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 TINF2Q9BSI4 451 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 TAB2Q9NYJ8 693 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 TRAF3IP3Q9Y228 551 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 ZKSCAN5Q9Y2L8 839 aa29.02■■■□□ 2.24
ATPAF1-202ENST00000371937 NMT1P30419 496 aaKnown RBP29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 ALCAMQ13740 583 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 SPECC1LQ69YQ0 1117 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 LRRC55Q6ZSA7 311 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 SLC17A8Q8NDX2 589 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 MCPH1Q8NEM0 835 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 VPS16Q9H269 839 aa29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 NRBP2Q9NSY0 501 aa29.01■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms