RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 AK8Q96MA6 479 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 NOC4LQ9BVI4 516 aaKnown RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 CFAP45Q9UL16 551 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 PP2D1A8MPX8 630 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 H0YGN5 161 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 YEATS4O95619 227 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 TIMP1P01033 207 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 MUTP22033 750 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 KLRC1P26715 233 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 LONP1P36776 959 aaKnown RBP17.81■□□□□ 0.44
PFDN4-201ENST00000371419 DNM1Q05193 864 aaKnown RBP17.81■□□□□ 0.44
PFDN4-201ENST00000371419 TARBP2Q15633 366 aaKnown RBP17.81■□□□□ 0.44
PFDN4-201ENST00000371419 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
PFDN4-201ENST00000371419 PPP1R12CQ9BZL4 782 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 FBXO2Q9UK22 296 aaPredicted RBP17.81■□□□□ 0.44
PFDN4-201ENST00000371419 PCDHA2Q9Y5H9 948 aa17.81■□□□□ 0.44
PFDN4-201ENST00000371419 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 SPTLC2O15270 562 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 MAGEB2O15479 319 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 CDC25AP30304 524 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 RBL2Q08999 1139 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 MTERF2Q49AM1 385 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 WNT8BQ93098 351 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 ZBTB10Q96DT7 871 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 NACC1Q96RE7 527 aa17.8■□□□□ 0.44
PFDN4-201ENST00000371419 C22orf31O95567 290 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
PFDN4-201ENST00000371419 ITGB8P26012 769 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 CYP2C18P33260 490 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 GRIN1Q05586 938 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 TBC1D8BQ0IIM8 1120 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 TRIM71Q2Q1W2 868 aaKnown RBP17.79■□□□□ 0.44
PFDN4-201ENST00000371419 PLA2G4FQ68DD2 849 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 POTEGQ6S5H5 508 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 KRI1Q8N9T8 703 aaKnown RBP17.79■□□□□ 0.44
PFDN4-201ENST00000371419 RETREG2Q8NC44 543 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 CEP170P1Q96L14 293 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 LBHD1Q9BQE6 289 aaPredicted RBP17.79■□□□□ 0.44
PFDN4-201ENST00000371419 SH2D3AQ9BRG2 576 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 MMTAG2Q9BU76 263 aaKnown RBP17.79■□□□□ 0.44
PFDN4-201ENST00000371419 CYP26B1Q9NR63 512 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 ANKEF1Q9NU02 776 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 PPME1Q9Y570 386 aa17.79■□□□□ 0.44
PFDN4-201ENST00000371419 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 SMIM35A0A1B0GVV1 85 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 ZBTB39O15060 712 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 CAND2O75155 1236 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 PPP6R2O75170 966 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 RPLP2P05387 115 aaKnown RBP17.78■□□□□ 0.44
PFDN4-201ENST00000371419 CKBP12277 381 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 THPOP40225 353 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 UBA7P41226 1012 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 NPEPPSP55786 919 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 KRT85P78386 507 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 ECM1Q16610 540 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 XKR9Q5GH70 373 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 RPAINQ86UA6 219 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 RSPH3Q86UC2 560 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 KCNG4Q8TDN1 519 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
PFDN4-201ENST00000371419 CSRNP2Q9H175 543 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 KIAA1024Q9UPX6 916 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 KDM3AQ9Y4C1 1321 aa17.78■□□□□ 0.44
PFDN4-201ENST00000371419 SLC26A4O43511 780 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 SELPP16109 830 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 NCLP19338 710 aaKnown RBP17.77■□□□□ 0.44
PFDN4-201ENST00000371419 TMEM199Q8N511 208 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 METTL13Q8N6R0 699 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 DNAJB3Q8WWF6 145 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 BADQ92934 168 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 CLIC6Q96NY7 704 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 CEP89Q96ST8 783 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 FAM49AQ9H0Q0 323 aaPredicted RBP17.77■□□□□ 0.44
PFDN4-201ENST00000371419 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 DDX19AQ9NUU7 478 aaKnown RBP17.77■□□□□ 0.44
PFDN4-201ENST00000371419 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 RCOR1Q9UKL0 485 aa17.77■□□□□ 0.44
PFDN4-201ENST00000371419 A0A087WWV3 80 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 TMOD1P28289 359 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 RFC5P40937 340 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 CCL23P55773 120 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 ZRSR1Q15695 479 aaKnown RBP17.76■□□□□ 0.43
PFDN4-201ENST00000371419 HYIQ5T013 277 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 ZNF618Q5T7W0 954 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 EFCAB12Q6NXP0 572 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 LRRC8DQ7L1W4 858 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 CABP7Q86V35 215 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 EXOC8Q8IYI6 725 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 ZNF579Q8NAF0 562 aaKnown RBP17.76■□□□□ 0.43
PFDN4-201ENST00000371419 CDK5RAP3Q96JB5 506 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 JPH2Q9BR39 696 aaPredicted RBP17.76■□□□□ 0.43
PFDN4-201ENST00000371419 NT5C3AQ9H0P0 336 aa17.76■□□□□ 0.43
PFDN4-201ENST00000371419 DBR1Q9UK59 544 aaKnown RBP17.76■□□□□ 0.43
PFDN4-201ENST00000371419 MAFO75444 373 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms