RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 ACTN1P12814 892 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 RASGRP2Q7LDG7 609 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SH3RF3Q8TEJ3 882 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NSMCE1Q8WV22 266 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TTC17Q96AE7 1141 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 INO80BQ9C086 356 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 DBNDD1Q9H9R9 158 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SH3GLB2Q9NR46 395 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 CNOT8Q9UFF9 292 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ARHGAP31Q2M1Z3 1444 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 A6NJR5 290 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 KRT14P02533 472 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 PLS3P13797 630 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ECE1P42892 770 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 PMS2P54278 862 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 IGBP1P78318 339 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SPARCL1Q14515 664 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NR1I3Q14994 352 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 DARS2Q6PI48 645 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 PCGF5Q86SE9 256 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ENGASEQ8NFI3 743 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ADPGKQ9BRR6 497 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 YIPF3Q9GZM5 350 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ETNK1Q9HBU6 452 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 POTEFA5A3E0 1075 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SPECC1L-ADORA2AF8WAN1 911 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TDP2O95551 362 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 PDHA1P08559 390 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 PEX3P56589 373 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 HSP90AA5PQ58FG0 334 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 POTEGQ6S5H5 508 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CCNI2Q6ZMN8 369 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 RAPH1Q70E73 1250 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CENPUQ71F23 418 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NIM1KQ8IY84 436 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 MIS12Q9H081 205 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 PPARGC1AQ9UBK2 798 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TMEM94Q12767 1356 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TARSL2A2RTX5 802 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 MEFVO15553 781 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 AP5Z1O43299 807 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 MAP3K7O43318 606 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CACNB3P54284 484 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SH3BGRP55822 239 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 FOXO4P98177 505 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 ZC3H18Q86VM9 953 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CCDC117Q8IWD4 279 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SYT2Q8N9I0 419 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 DNAAF3Q8N9W5 541 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CHMP6Q96FZ7 201 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TRIM9Q9C026 710 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NACA2Q9H009 215 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 ZNF408Q9H9D4 720 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SRP68Q9UHB9 627 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 GGT7Q9UJ14 662 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 TFR2Q9UP52 801 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NOC2LQ9Y3T9 749 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 HECW2Q9P2P5 1572 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 REREQ9P2R6 1566 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 USP42Q9H9J4 1324 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 GYG2O15488 501 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 CFLARO15519 480 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NCF2P19878 526 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 GARSP41250 739 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 OSTNP61366 133 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 GRIN1Q05586 938 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 IFRD2Q12894 506 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 DRAP1Q14919 205 aaPredicted RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NBPF10Q6P3W6 841 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 FAM196AQ6ZSG2 479 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SESTD1Q86VW0 696 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SRBD1Q8N5C6 995 aaKnown RBP8.28□□□□□ -1.08
COL21A1-203ENST00000370819 NBPF15Q8N660 670 aa8.28□□□□□ -1.08
COL21A1-203ENST00000370819 SUPT20HQ8NEM7 779 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms