RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 EVI5O60447 810 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 CLTBP09497 229 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 IGBP1P78318 339 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 HIC1Q14526 733 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 ECM1Q16610 540 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 AXDND1Q5T1B0 1012 aaPredicted RBP17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 RASSF8Q8NHQ8 419 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 EPSTI1Q96J88 318 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 CEP170P1Q96L14 293 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 JPH2Q9BR39 696 aaPredicted RBP17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 DNM3Q9UQ16 869 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 PCDHA2Q9Y5H9 948 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 WDR81Q562E7 1941 aa17.35■□□□□ 0.37
PRPF38B-202ENST00000370022 TREHO43280 583 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 RFC5P40937 340 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 MTERF2Q49AM1 385 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 CCDC155Q8N6L0 562 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 DPF3Q92784 378 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 CTAGE1Q96RT6 745 aa17.34■□□□□ 0.37
PRPF38B-202ENST00000370022 C22orf31O95567 290 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 KLRC1P26715 233 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 RARRES1P49788 294 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 ZNF200P98182 395 aaPredicted RBP17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 GRB10Q13322 594 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 ZRSR1Q15695 479 aaKnown RBP17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 TMEM119Q4V9L6 283 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 XKR9Q5GH70 373 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 SPECC1Q5M775 1068 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 PLA2G4FQ68DD2 849 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 SHC4Q6S5L8 630 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 CAGE1Q8TC20 777 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 TRAPPC12Q8WVT3 735 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 CEP89Q96ST8 783 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.37
PRPF38B-202ENST00000370022 SMIM35A0A1B0GVV1 85 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 ZBTB39O15060 712 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 GAS2O43903 313 aaKnown RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 CAND2O75155 1236 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 DGAT1O75907 488 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 EYA4O95677 639 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 CYP2C9P11712 490 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 NPEPPSP55786 919 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 RBL2Q08999 1139 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 KARSQ15046 597 aaKnown RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 RESP18Q5W5W9 173 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 USP49Q70CQ1 688 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 RSPH3Q86UC2 560 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 PYM1Q9BRP8 204 aaKnown RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 PDLIM7Q9NR12 457 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 TMEM39AQ9NV64 488 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 TBX21Q9UL17 535 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 A0A1W2PQ27 194 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 A0A1W2PQ64 194 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 A0A1W2PQD8 194 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 ARHGEF35A5YM69 484 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 TNRC18O15417 2968 aaPredicted RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 MAFO75444 373 aaPredicted RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 TMOD1P28289 359 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 BFSP2Q13515 415 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 DHX33Q9H6R0 707 aaKnown RBP17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 NR2E3Q9Y5X4 410 aa17.32■□□□□ 0.36
PRPF38B-202ENST00000370022 IGKV6-21A0A0C4DH24 114 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 E9PMD0 336 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 KIAA0355O15063 1070 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 PLCG1P19174 1290 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 CMA1P23946 247 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 RRAGBQ5VZM2 374 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 NME8Q8N427 588 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 SH2D3AQ9BRG2 576 aa17.31■□□□□ 0.36
PRPF38B-202ENST00000370022 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 DNM2P50570 870 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 METTL13Q8N6R0 699 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 PLIN2Q99541 437 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 HIPK3Q9H422 1215 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms