RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 COPEO14579 308 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 A0A087WWV3 80 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 ANXA13P27216 316 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 GRIN1Q05586 938 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 CSPG5O95196 566 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 SLC8A2Q9UPR5 921 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 SNX2O60749 519 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 SNX5Q9Y5X3 404 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 ZC3H12BQ5HYM0 836 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 TTC30BQ8N4P2 665 aa13.34□□□□□ -0.27
HCFC1-202ENST00000369984 STX18Q9P2W9 335 aaKnown RBP13.34□□□□□ -0.27
HCFC1-202ENST00000369984 FGGP02679 453 aa13.33□□□□□ -0.27
HCFC1-202ENST00000369984 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.27
HCFC1-202ENST00000369984 TBCKQ8TEA7 893 aa13.33□□□□□ -0.27
HCFC1-202ENST00000369984 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.27
HCFC1-202ENST00000369984 MICAL3Q7RTP6 2002 aa13.33□□□□□ -0.27
HCFC1-202ENST00000369984 ABCC4O15439 1325 aa13.33□□□□□ -0.27
HCFC1-202ENST00000369984 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 ZFYVE1Q9HBF4 777 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 LSG1Q9H089 658 aaKnown RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 TSC22D4Q9Y3Q8 395 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 ZMYM3Q14202 1370 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 ANP32DO95626 131 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 PLCG1P19174 1290 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 CHAMP1Q96JM3 812 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 SAYSD1Q9NPB0 183 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 MMP1P03956 469 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 SLC9A5Q14940 896 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 CNPY4Q8N129 248 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 OSTNP61366 133 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 KRT39Q6A163 491 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 VSTM4Q8IW00 320 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 PAIP2BQ9ULR5 123 aaKnown RBP13.33□□□□□ -0.28
HCFC1-202ENST00000369984 MLH3Q9UHC1 1453 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 COPS2P61201 443 aa13.33□□□□□ -0.28
HCFC1-202ENST00000369984 KRT37O76014 449 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 KRT4P19013 534 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 CIITAP33076 1130 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 PSMD2Q13200 908 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 SYNMO15061 1565 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 TADA2BQ86TJ2 420 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 CHGBP05060 677 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 HDAC4P56524 1084 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 ZBED6P86452 979 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 CHRNDQ07001 517 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 ZNF263O14978 683 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 PALMO75781 387 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 SERPINB2P05120 415 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 ADA2Q9NZK5 511 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 KRT87PA6NCN2 255 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 PI4K2BG5E9Z4 385 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 GCFC2P16383 781 aaKnown RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 SSH3Q8TE77 659 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 EAF2Q96CJ1 260 aaPredicted RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
HCFC1-202ENST00000369984 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
HCFC1-202ENST00000369984 DIAPH2O60879 1101 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 RWDD2BP57060 319 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 GAS2L3Q86XJ1 694 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms