RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PEX5LQ8IYB4 626 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 DZIP1LQ8IYY4 767 aaKnown RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 C7orf57Q8NEG2 295 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PPP1R14CQ8TAE6 165 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ERMNQ8TAM6 284 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 BRSK1Q8TDC3 778 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 BRI3BPQ8WY22 251 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CEP95Q96GE4 821 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 LBHD1Q9BQE6 289 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MAK16Q9BXY0 300 aaKnown RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ZNF700Q9H0M5 742 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 TNMDQ9H2S6 317 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 KCNF1Q9H3M0 494 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 TTC12Q9H892 705 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PRKAG3Q9UGI9 489 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 LAMP5Q9UJQ1 280 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PNMA3Q9UL41 463 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 AFG3L2Q9Y4W6 797 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 SLC4A7Q9Y6M7 1214 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MYH3P11055 1940 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MAST3O60307 1309 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 MOXD2PA6NHM9 499 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 FSBPO95073 299 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 MBD4O95243 580 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ALAS1P13196 640 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 IDO1P14902 403 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 FGFR4P22455 802 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 GCKP35557 465 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 MAPK9P45984 424 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 BNIP1Q12981 228 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 SQSTM1Q13501 440 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CAMK2BQ13554 666 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 SMC1AQ14683 1233 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CCNG2Q16589 344 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 KIAA0753Q2KHM9 967 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TLDC1Q6P9B6 456 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 DSTYKQ6XUX3 929 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CAPN12Q6ZSI9 719 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGEF18Q6ZSZ5 1173 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 NLRP14Q86W24 1093 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 IQCA1Q86XH1 822 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 RPAP2Q8IXW5 612 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 C7orf61Q8IZ16 206 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CEP112Q8N8E3 955 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PLPP7Q8NBV4 271 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 C3orf20Q8ND61 904 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 IL17REQ8NFR9 667 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGAP45Q92619 1136 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 EMID1Q96A84 441 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ALS2CR12Q96Q35 445 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 DEPDC7Q96QD5 511 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 UHRF1Q96T88 793 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 MTRQ99707 1265 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 LRFN3Q9BTN0 628 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TMUB1Q9BVT8 246 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ASPSCR1Q9BZE9 553 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PAPOLBQ9NRJ5 636 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ANKEF1Q9NU02 776 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 MORF4L1Q9UBU8 362 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ERICH2A1L162 156 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 RASGRP1O95267 797 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 FOSL2P15408 326 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 FERP16591 822 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ATF4P18848 351 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 POLR2BP30876 1174 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CTNNA1P35221 906 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CLCN2P51788 898 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 LAMB3Q13751 1172 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PDE1CQ14123 709 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 SLC45A4Q5BKX6 768 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CWF19L1Q69YN2 538 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 C1orf228Q6PIY5 440 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 SPOCD1Q6ZMY3 1216 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CKAP2LQ8IYA6 745 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TMCO5AQ8N6Q1 288 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TSGA13Q96PP4 275 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 DNAJC7Q99615 494 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PTPN18Q99952 460 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 NTPCRQ9BSD7 190 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PLA2G12BQ9BX93 195 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 R3HDMLQ9H3Y0 253 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 NRDE2Q9H7Z3 1164 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TUBA8Q9NY65 449 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TSR3Q9UJK0 312 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 DCTN4Q9UJW0 460 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CDV3Q9UKY7 258 aaKnown RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 ZNF215Q9UL58 517 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 PYCARDQ9ULZ3 195 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CSADQ9Y600 493 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 EPN1Q9Y6I3 576 aaPredicted RBP5.56□□□□□ -1.52
UBE3D-202ENST00000369746 DGKBQ9Y6T7 804 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 TNKSO95271 1327 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 IRS2Q9Y4H2 1338 aa5.56□□□□□ -1.52
UBE3D-202ENST00000369746 CCL15-CCL14A0A0B4J2E2 113 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms