RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 BCL9O00512 1426 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 A8MUI8 341 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 GFPT2O94808 682 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 GPBP1Q86WP2 473 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 CUL5Q93034 780 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 CHORDC1Q9UHD1 332 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 EME2A4GXA9 379 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 TAX1BP1Q86VP1 789 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 PROM2Q8N271 834 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 EYA3Q99504 573 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
PHGDH-201ENST00000369407 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 MYH1P12882 1939 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
PHGDH-201ENST00000369407 MEIS1O00470 390 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 UPP2O95045 317 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 PAEPP09466 180 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ITPK1Q13572 414 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SLC29A2Q14542 456 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC50Q8IVM0 306 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 CEP95Q96GE4 821 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ZNF317Q96PQ6 595 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 TMOD4Q9NZQ9 345 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 DNAJC8O75937 253 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 KRT13P13646 458 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 FGFR4P22455 802 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 19.3
PHGDH-201ENST00000369407 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SNX1Q13596 522 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 DCAF12L1Q5VU92 463 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 NT5DC3Q86UY8 548 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ADAM7Q9H2U9 754 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 EPB41L4BQ9H329 900 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ATP6V0A4Q9HBG4 840 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 STK38LQ9Y2H1 464 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 CLIC2O15247 247 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 ANP32DO95626 131 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 PON1P27169 355 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SLC8A1P32418 973 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 CASP4P49662 377 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 EXOC3L4Q17RC7 722 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 FBXO25Q8TCJ0 367 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 AGAP11Q8TF27 550 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 HAS1Q92839 578 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 TLCD1Q96CP7 247 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-201ENST00000369407 DLEC1Q9Y238 1755 aa13.36□□□□□ -0.27
PHGDH-201ENST00000369407 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 CETN3O15182 167 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 GALCP54803 685 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 PSMD2Q13200 908 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 TMEM119Q4V9L6 283 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 ANKS4BQ8N8V4 417 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 RAB34Q9BZG1 259 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 KCTD10Q9H3F6 313 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
PHGDH-201ENST00000369407 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
PHGDH-201ENST00000369407 TRIM33Q9UPN9 1127 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
PHGDH-201ENST00000369407 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 UBOX5O94941 541 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 ADCY7P51828 1080 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 PMS2P54278 862 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms