RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GUCA1BQ9UMX6 200 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 SRRM3A6NNA2 597 aaPredicted RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 RNF225M0QZC1 329 aaPredicted RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 DNM1LO00429 736 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 USO1O60763 962 aaKnown RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 ATP1A1P05023 1023 aaKnown RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 AKR1B1P15121 316 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 ERCC3P19447 782 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 CNGA1P29973 690 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 SKOR1P84550 965 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 C12orf60Q5U649 245 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 ALS2CLQ60I27 953 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 Q7L0L9 218 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 DPP9Q86TI2 863 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.37
USF1-201ENST00000368019 CLEC10AQ8IUN9 316 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 BLIDQ8IZY5 108 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 ABRAQ8N0Z2 381 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 FAM76AQ8TAV0 307 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 MMS19Q96T76 1030 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 SH3GL2Q99962 352 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
USF1-201ENST00000368019 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 M0R2N6 131 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 WNT7AO00755 349 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 PJA2O43164 708 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 TACC1O75410 805 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 CASP1P29466 404 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 KIF5AQ12840 1032 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 IL17AQ16552 155 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 EMC10Q5UCC4 262 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
USF1-201ENST00000368019 P2RX5Q93086 422 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 CAVIN3Q969G5 261 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 BLZF1Q9H2G9 400 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 MROH8Q9H579 483 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
USF1-201ENST00000368019 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 STXBP5LQ9Y2K9 1186 aa12.7□□□□□ -0.38
USF1-201ENST00000368019 CYP2D7A0A087X1C5 515 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 MINDY4BA8MYZ0 360 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 DLL1O00548 723 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 TRIM66O15016 1216 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 SEPT4O43236 478 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 ZEB2O60315 1214 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 FGFR1OPO95684 399 aaKnown RBP12.69□□□□□ -0.38
USF1-201ENST00000368019 ABL1P00519 1130 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 CDC25AP30304 524 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 CDK8P49336 464 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 EPHB4P54760 987 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 RTP1P59025 263 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 ICA1Q05084 483 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 SPA17Q15506 151 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 ICE2Q659A1 982 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 PIK3AP1Q6ZUJ8 805 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
USF1-201ENST00000368019 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.69□□□□□ -0.38
USF1-201ENST00000368019 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
USF1-201ENST00000368019 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 LZTS2Q9BRK4 669 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
USF1-201ENST00000368019 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 USP17L21D6R901 530 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 AGPSO00116 658 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 WDR46O15213 610 aaKnown RBP12.68□□□□□ -0.38
USF1-201ENST00000368019 PRDM1O75626 825 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 FLOT1O75955 427 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
USF1-201ENST00000368019 AMPD3Q01432 767 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 TMEM132BQ14DG7 1078 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 SNX17Q15036 470 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 FKBP15Q5T1M5 1219 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 GJC2Q5T442 439 aaPredicted RBP12.68□□□□□ -0.38
USF1-201ENST00000368019 FAM109BQ6ICB4 259 aaPredicted RBP12.68□□□□□ -0.38
USF1-201ENST00000368019 SLC39A5Q6ZMH5 540 aa12.68□□□□□ -0.38
USF1-201ENST00000368019 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms