RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 DYMQ7RTS9 669 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 ADSSL1Q8N142 457 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 GIMAP8Q8ND71 665 aaPredicted RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 HPS3Q969F9 1004 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 CAPNS2Q96L46 248 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 NACC1Q96RE7 527 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 PCYT2Q99447 389 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ZSWIM4Q9H7M6 989 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 JPH1Q9HDC5 661 aaPredicted RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 PDGFCQ9NRA1 345 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 RMND1Q9NWS8 449 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 SLC9A2Q9UBY0 812 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 PCDHA2Q9Y5H9 948 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 IGKV6D-21A0A0A0MT36 114 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 IKBKBO14920 756 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 SORBS3O60504 671 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
VTA1-201ENST00000367621 HOXC6P09630 235 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 ATP4AP20648 1035 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 PTGS1P23219 599 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 ERCC5P28715 1186 aaPredicted RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 PRCPP42785 496 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 QARSP47897 775 aaKnown RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 CAP1Q01518 475 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 NOGQ13253 232 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 DEFB115Q30KQ5 88 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 COBLL1Q53SF7 1204 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 RINT1Q6NUQ1 792 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 C4orf19Q8IY42 314 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 SMAP1Q8IYB5 467 aaPredicted RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 KIAA0895Q8NCT3 520 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 ENOX1Q8TC92 643 aaKnown RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 MAML3Q96JK9 1138 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 LRRC27Q9C0I9 530 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 NAT10Q9H0A0 1025 aaKnown RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 DBR1Q9UK59 544 aaKnown RBP10.57□□□□□ -0.72
VTA1-201ENST00000367621 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
VTA1-201ENST00000367621 TMEM150BA6NC51 233 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 SUPT20HL2P0C7V6 817 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 PSMC5P62195 406 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 COASYQ13057 564 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 MAP2K5Q13163 448 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 GRM1Q13255 1194 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 NEDD9Q14511 834 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
VTA1-201ENST00000367621 SWSAP1Q6NVH7 229 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 DPP9Q86TI2 863 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 CCDC60Q8IWA6 550 aaPredicted RBP10.56□□□□□ -0.72
VTA1-201ENST00000367621 GLIS3Q8NEA6 775 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 COPS5Q92905 334 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 FGFBP2Q9BYJ0 223 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 GABBR1Q9UBS5 961 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 IGSF9BQ9UPX0 1349 aa10.56□□□□□ -0.72
VTA1-201ENST00000367621 RSPH10B2B2RC85 870 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 GGPS1O95749 300 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 PSAPP07602 524 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 RSPH10BP0C881 870 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 ZNF18P17022 549 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 RARRES1P49788 294 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 PMS1P54277 932 aaKnown RBP10.55□□□□□ -0.72
VTA1-201ENST00000367621 MYL5Q02045 173 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 SP4Q02446 784 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 RAD51AP2Q09MP3 1159 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 MAPK7Q13164 816 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 MIS18BP1Q6P0N0 1132 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 ANO5Q75V66 913 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 TRMT44Q8IYL2 757 aaKnown RBP10.55□□□□□ -0.72
VTA1-201ENST00000367621 DAW1Q8N136 415 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 MSL3Q8N5Y2 521 aaKnown RBP10.55□□□□□ -0.72
VTA1-201ENST00000367621 PDLIM2Q96JY6 352 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 CEP89Q96ST8 783 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 MPHOSPH6Q99547 160 aaKnown RBP10.55□□□□□ -0.72
VTA1-201ENST00000367621 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 POLD4Q9HCU8 107 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 ANKEF1Q9NU02 776 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 PANK4Q9NVE7 773 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
VTA1-201ENST00000367621 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
VTA1-201ENST00000367621 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.54□□□□□ -0.72
VTA1-201ENST00000367621 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
VTA1-201ENST00000367621 BACH1O14867 736 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms