RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 BTBD18B2RXH4 712 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 H3BQV1 296 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 CA3P07451 260 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 PBX2P40425 430 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 DNM2P50570 870 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 RABGGTBP53611 331 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 PSMC5P62195 406 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 TMEM62Q0P6H9 643 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 ST3GAL1Q11201 340 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 ORC2Q13416 577 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-216ENST00000366744 MBTPS1Q14703 1052 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 TMEM266Q2M3C6 531 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 XKR3Q5GH77 459 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 MARCH8Q5T0T0 291 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 DBF4BQ8NFT6 615 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 NEK9Q8TD19 979 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 GJA10Q969M2 543 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 JPH2Q9BR39 696 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-216ENST00000366744 FTHL17Q9BXU8 183 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-216ENST00000366744 SEMA6BQ9H3T3 888 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 KCNMB3Q9NPA1 279 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-216ENST00000366744 AKT3Q9Y243 479 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 COL4A6Q14031 1691 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 CHD9Q3L8U1 2897 aa10.47□□□□□ -0.73
MRPL55-216ENST00000366744 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 C22orf31O95567 290 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 ATP2B1P20020 1258 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 QARSP47897 775 aaKnown RBP10.46□□□□□ -0.73
MRPL55-216ENST00000366744 DEFB103AP81534 67 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 MTERF2Q49AM1 385 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 FBXO47Q5MNV8 452 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 FAM43BQ6ZT52 329 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-216ENST00000366744 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 EXOC8Q8IYI6 725 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 BANK1Q8NDB2 785 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 SLC7A3Q8WY07 619 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 GUCD1Q96NT3 240 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 YME1L1Q96TA2 773 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.73
MRPL55-216ENST00000366744 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-216ENST00000366744 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 SQORQ9Y6N5 450 aa10.46□□□□□ -0.73
MRPL55-216ENST00000366744 MYH11P35749 1972 aa10.46□□□□□ -0.74
MRPL55-216ENST00000366744 COL6A3P12111 3177 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 KDM3AQ9Y4C1 1321 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 GJB5O95377 273 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 CHRNA1P02708 482 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 MCM7P33993 719 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 TRAPPC10P48553 1259 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 POLGP54098 1239 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-216ENST00000366744 MGAT3Q09327 533 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 LPIN1Q14693 890 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 UGCGQ16739 394 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 MCTP1Q6DN14 999 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 FAM117BQ6P1L5 589 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 ERMNQ8TAM6 284 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 MYLIPQ8WY64 445 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 VWCEQ96DN2 955 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 TMX3Q96JJ7 454 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 CDX2Q99626 313 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-216ENST00000366744 RAD9AQ99638 391 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 LXNQ9BS40 222 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 RAB34Q9BZG1 259 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 TTC12Q9H892 705 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-216ENST00000366744 SUGCTQ9HAC7 445 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 VAV3Q9UKW4 847 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 YBX2Q9Y2T7 364 aaKnown RBP10.45□□□□□ -0.74
MRPL55-216ENST00000366744 PPME1Q9Y570 386 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 INSL6Q9Y581 213 aa10.45□□□□□ -0.74
MRPL55-216ENST00000366744 FNDC1Q4ZHG4 1894 aaPredicted RBP10.44□□□□□ -0.74
MRPL55-216ENST00000366744 CHD7Q9P2D1 2997 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 DENND3A2RUS2 1198 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 GPR182O15218 404 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
MRPL55-216ENST00000366744 RPS6KA5O75582 802 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 UPP2O95045 317 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 VTNP04004 478 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 P4HBP07237 508 aaKnown RBP10.44□□□□□ -0.74
MRPL55-216ENST00000366744 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 ATP4AP20648 1035 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 CD52P31358 61 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 TXKP42681 527 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 CLCN3P51790 818 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 CDC42EP1Q00587 391 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
MRPL55-216ENST00000366744 EPHA7Q15375 998 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 EARS2Q5JPH6 523 aaKnown RBP10.44□□□□□ -0.74
MRPL55-216ENST00000366744 TTC38Q5R3I4 469 aa10.44□□□□□ -0.74
MRPL55-216ENST00000366744 HAUS3Q68CZ6 603 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms