RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 CALM1P0DP23 149 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 CALM2P0DP24 149 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 CALM3P0DP25 149 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
MRPL55-213ENST00000366740 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 TCF15Q12870 199 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 RBM23Q86U06 439 aaKnown RBP13.31□□□□□ -0.28
MRPL55-213ENST00000366740 NME8Q8N427 588 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 CCDC82Q8N4S0 544 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 AZI2Q9H6S1 392 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-213ENST00000366740 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 PCDHGC5Q9Y5F6 944 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 CACNA1HO95180 2353 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
MRPL55-213ENST00000366740 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
MRPL55-213ENST00000366740 ARID2Q68CP9 1835 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 hCG_1642624A0A1W2PR95 340 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 EPB41L2O43491 1005 aaKnown RBP13.3□□□□□ -0.28
MRPL55-213ENST00000366740 MGEA5O60502 916 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 ATG7O95352 703 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
MRPL55-213ENST00000366740 ACTR2P61160 394 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 KRT76Q01546 638 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 KCNC3Q14003 757 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 DUSP6Q16828 381 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 MTHFD1LQ6UB35 978 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 Q6ZUG5 572 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 MICU3Q86XE3 530 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
MRPL55-213ENST00000366740 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 ASIC4Q96FT7 647 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 CDCA3Q99618 268 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-213ENST00000366740 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 TLE6Q9H808 572 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 TLR9Q9NR96 1032 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 COL1A2P08123 1366 aa13.3□□□□□ -0.28
MRPL55-213ENST00000366740 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 FSCN2O14926 492 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 RPS6KB1P23443 525 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 CDC27P30260 824 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 SLC26A2P50443 739 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 STAT5BP51692 787 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 FUT2Q10981 343 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 TMEM266Q2M3C6 531 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 PDE12Q6L8Q7 609 aaKnown RBP13.29□□□□□ -0.28
MRPL55-213ENST00000366740 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 SNX27Q96L92 541 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 PCDHB12Q9Y5F1 795 aa13.29□□□□□ -0.28
MRPL55-213ENST00000366740 C9IYK1 514 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 PER2O15055 1255 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 FGF18O76093 207 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 ERVFC1P60507 584 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
MRPL55-213ENST00000366740 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-213ENST00000366740 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 FBXL16Q8N461 479 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 COLGALT1Q8NBJ5 622 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 RASGRP4Q8TDF6 673 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 BRF1Q92994 677 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 SDF4Q9BRK5 362 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 AGXT2Q9BYV1 514 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 CWH43Q9H720 699 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 AAASQ9NRG9 546 aa13.28□□□□□ -0.28
MRPL55-213ENST00000366740 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-213ENST00000366740 NOC2LQ9Y3T9 749 aaKnown RBP13.28□□□□□ -0.28
MRPL55-213ENST00000366740 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 ZBTB43O43298 467 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 ST18O60284 1047 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 RPS6KA5O75582 802 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 ARP10275 920 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 KLRC1P26715 233 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 VCPP55072 806 aaKnown RBP13.27□□□□□ -0.29
MRPL55-213ENST00000366740 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.29
MRPL55-213ENST00000366740 RTN1Q16799 776 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
MRPL55-213ENST00000366740 ODR4Q5SWX8 454 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms