RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 DDTLA6NHG4 134 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 CCDC188H7C350 402 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 EPHB6O15197 1021 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 GBP2P32456 591 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 IFI16Q16666 785 aaKnown RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 TDRD12Q587J7 1177 aaKnown RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 C10orf76Q5T2E6 689 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 SH3BP5LQ7L8J4 393 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ANKS4BQ8N8V4 417 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ACTRT1Q8TDG2 376 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 RAPGEF5Q92565 580 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 MTMR4Q9NYA4 1195 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 SIPA1L1O43166 1804 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ATP6V1G2O95670 118 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 PLCG1P19174 1290 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ERVK-9P63128 1117 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 BYSLQ13895 437 aaKnown RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ITIH4Q14624 930 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 GUF1Q8N442 669 aaKnown RBP20.78■□□□□ 0.92
CMTM3-201ENST00000361909 LZTS2Q9BRK4 669 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 EBF2Q9HAK2 575 aa20.78■□□□□ 0.92
CMTM3-201ENST00000361909 ORC2Q13416 577 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-201ENST00000361909 UAP1Q16222 522 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-201ENST00000361909 SPDYE2Q495Y8 402 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 ODF2Q5BJF6 829 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 CPLX4Q7Z7G2 160 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 CUL5Q93034 780 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 ZBED3Q96IU2 234 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-201ENST00000361909 SEMA6BQ9H3T3 888 aa20.77■□□□□ 0.92
CMTM3-201ENST00000361909 ZNF70Q9UC06 446 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-201ENST00000361909 GREB1LQ9C091 1923 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-201ENST00000361909 PVALEFA0A1B0GWK0 134 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 M0R2N6 131 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 FZD9O00144 591 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 AKR1B1P15121 316 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 DRD4P21917 467 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 ELF3P78545 371 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-201ENST00000361909 SLC18A3Q16572 532 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 QPCTQ16769 361 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 SFMBT2Q5VUG0 894 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 TATDN1Q6P1N9 297 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 CCDC197Q8NCU1 140 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 SCFD2Q8WU76 684 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
CMTM3-201ENST00000361909 ATP2B2Q01814 1243 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 PPP2R5AQ15172 486 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 ANKRD13CQ8N6S4 541 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 KIAA0895Q8NCT3 520 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 CHMP6Q96FZ7 201 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 SLITRK6Q9H5Y7 841 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 NOD2Q9HC29 1040 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 POLD4Q9HCU8 107 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 MAD2L2Q9UI95 211 aa20.76■□□□□ 0.91
CMTM3-201ENST00000361909 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-201ENST00000361909 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 NEBLO76041 1014 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 SMARCA1P28370 1054 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 FAM151AQ8WW52 585 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 DNAJC18Q9H819 358 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 CCT8L1PA6NM43 557 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 ASAP2O43150 1006 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 TTLL1O95922 423 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 ZNF280AP59817 542 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-201ENST00000361909 RPS6KA1Q15418 735 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 TSG101Q99816 390 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 FAM129AQ9BZQ8 928 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 RIC8AQ9NPQ8 531 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 SLC12A4Q9UP95 1085 aa20.75■□□□□ 0.91
CMTM3-201ENST00000361909 FTCDO95954 541 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 EIF6P56537 245 aaKnown RBP20.74■□□□□ 0.91
CMTM3-201ENST00000361909 SPRED3Q2MJR0 410 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 C11orf91Q3C1V1 193 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 ERMARDQ5T6L9 678 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 UNC13DQ70J99 1090 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 FAM83AQ86UY5 434 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 HOOK3Q86VS8 718 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 TMEM60Q9H2L4 133 aa20.74■□□□□ 0.91
CMTM3-201ENST00000361909 HERC5Q9UII4 1024 aaKnown RBP20.74■□□□□ 0.91
CMTM3-201ENST00000361909 SSBP05455 408 aaKnown RBP eCLIP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 FCER1AP12319 257 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 USP11P51784 963 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 ICA1Q05084 483 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 CERKLQ49MI3 558 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 SEC14L1Q92503 715 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 TLCD1Q96CP7 247 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 FAM114A2Q9NRY5 505 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 STK17AQ9UEE5 414 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 PGRMC1O00264 195 aaKnown RBP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 BUB1BO60566 1050 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 OR52Z1P0C646 297 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 EP400NLQ6ZTU2 488 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 FAM212AQ96EL1 285 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 XPO6Q96QU8 1125 aaKnown RBP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 MOV10L1Q9BXT6 1211 aaKnown RBP20.73■□□□□ 0.91
CMTM3-201ENST00000361909 MYOZ2Q9NPC6 264 aa20.73■□□□□ 0.91
CMTM3-201ENST00000361909 PAX7P23759 505 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 KLRC1P26715 233 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 EHHADHQ08426 723 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms