RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 RGS18Q9NS28 235 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 KCNH7Q9NS40 1196 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 PUF60Q9UHX1 559 aaKnown RBP15.83■□□□□ 0.12
VPS29-201ENST00000360579 NFASCO94856 1347 aa15.83■□□□□ 0.12
VPS29-201ENST00000360579 FSCN2O14926 492 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 GPR182O15218 404 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 HOXB8P17481 243 aaPredicted RBP15.82■□□□□ 0.12
VPS29-201ENST00000360579 LAG3P18627 525 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 IBSPP21815 317 aaPredicted RBP15.82■□□□□ 0.12
VPS29-201ENST00000360579 ANTXR2P58335 489 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 ACTR2P61160 394 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 VN1R2Q8NFZ6 395 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 TRAPPC12Q8WVT3 735 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 ADAM2Q99965 735 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 LY9Q9HBG7 655 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 ERVK-5Q9HDB9 667 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 NGRNQ9NPE2 291 aaKnown RBP15.82■□□□□ 0.12
VPS29-201ENST00000360579 FAM86C1Q9NVL1 165 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 PCDHA6Q9UN73 950 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 GINS2Q9Y248 185 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 NR2E1Q9Y466 385 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 PCDHA8Q9Y5H6 950 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 KIAA1671Q9BY89 1806 aa15.82■□□□□ 0.12
VPS29-201ENST00000360579 DMDP11532 3685 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 IGHDP01880 384 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 CALM1P0DP23 149 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 CALM2P0DP24 149 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 CALM3P0DP25 149 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 TECP42680 631 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 ERVFC1P60507 584 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 PTH1RQ03431 593 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 UBE2SQ16763 222 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 ANKRD54Q6NXT1 300 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 NFXL1Q6ZNB6 911 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 MB21D2Q8IYB1 491 aaPredicted RBP15.81■□□□□ 0.12
VPS29-201ENST00000360579 UBALD2Q8IYN6 164 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
VPS29-201ENST00000360579 COLGALT1Q8NBJ5 622 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 RIPOR3Q96MK2 946 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 MXRA8Q9BRK3 442 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 MYL10Q9BUA6 226 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 S1PR5Q9H228 398 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 ATP6V0A4Q9HBG4 840 aa15.81■□□□□ 0.12
VPS29-201ENST00000360579 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
VPS29-201ENST00000360579 KMT2EQ8IZD2 1858 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 C9IYK1 514 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 HOXA2O43364 376 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 HBP1O60381 514 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 KLRC1P26715 233 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 RBM10P98175 930 aaKnown RBP15.8■□□□□ 0.12
VPS29-201ENST00000360579 KCNC3Q14003 757 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
VPS29-201ENST00000360579 ELAC1Q9H777 363 aaKnown RBP15.8■□□□□ 0.12
VPS29-201ENST00000360579 ENTPD7Q9NQZ7 604 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 TMEM161AQ9NX61 479 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 ST3GAL5Q9UNP4 418 aa15.8■□□□□ 0.12
VPS29-201ENST00000360579 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
VPS29-201ENST00000360579 COL1A2P08123 1366 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 PROB1E7EW31 1015 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 GALR2O43603 387 aaPredicted RBP15.79■□□□□ 0.12
VPS29-201ENST00000360579 MGEA5O60502 916 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 ATG7O95352 703 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 PPM1AP35813 382 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 MTMR3Q13615 1198 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 TPRNQ4KMQ1 711 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 CEP55Q53EZ4 464 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 PLPP4Q5VZY2 271 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 CASP10Q92851 521 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 TMEM87BQ96K49 555 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 NECTIN4Q96NY8 510 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 TCF25Q9BQ70 676 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 TAF6LQ9Y6J9 622 aa15.79■□□□□ 0.12
VPS29-201ENST00000360579 IGKV6D-21A0A0A0MT36 114 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 H0Y858 1186 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 BACH1O14867 736 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 PRC1O43663 620 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
VPS29-201ENST00000360579 CHMLP26374 656 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 PDE4AP27815 886 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 MCM5P33992 734 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 CRYBB1P53674 252 aaPredicted RBP15.78■□□□□ 0.12
VPS29-201ENST00000360579 FAM189BP81408 668 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 KRT17Q04695 432 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 CES5AQ6NT32 575 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 SYCE2Q6PIF2 218 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 HEATR3Q7Z4Q2 680 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 KIAA0319LQ8IZA0 1049 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 KREMEN2Q8NCW0 462 aa15.78■□□□□ 0.12
VPS29-201ENST00000360579 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms