RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 MAP4P27816 1152 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 MRPS35P82673 323 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 HIC1Q14526 733 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 SLC17A8Q8NDX2 589 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 GOLPH3LQ9H4A5 285 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 PRPSAP2O60256 369 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 ERFP50548 548 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 POLGP54098 1239 aaPredicted RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 CATSPER3Q86XQ3 398 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 HOXA7P31268 230 aaPredicted RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 POLA2Q14181 598 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 HACE1Q8IYU2 909 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 EXT2Q93063 718 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 TRPM2O94759 1503 aa14.35□□□□□ -0.11
CCDC144A-203ENST00000360495 M0R2C6 588 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 LPXNO60711 386 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 ABL1P00519 1130 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 HLA-DPA1P20036 260 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 CCDC85BQ15834 202 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 TBCKQ8TEA7 893 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SNRNP27Q8WVK2 155 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 ZBTB18Q99592 522 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SORBS3O60504 671 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 CARSP49589 748 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 LRRC24Q50LG9 513 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 CDC26Q8NHZ8 85 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SUGCTQ9HAC7 445 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SLC40A1Q9NP59 571 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 GTSE1Q9NYZ3 720 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 PCDHA1Q9Y5I3 950 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 IFNAR1P17181 557 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 TBC1D10BQ4KMP7 808 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 RUBCNQ92622 972 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 NAF1Q96HR8 494 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 HEMGNQ9BXL5 484 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 TMEM206Q9H813 350 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 GOLGA8MH3BSY2 632 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 DDIT3P35638 169 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 CTSWP56202 376 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 COPS2P61201 443 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 EFTUD2Q15029 972 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 KRT39Q6A163 491 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 SPATA4Q8NEY3 305 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 KLC2Q9H0B6 622 aa14.34□□□□□ -0.11
CCDC144A-203ENST00000360495 FAM187AA6NFU0 413 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 LRRC36Q1X8D7 754 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 OR9Q1Q8NGQ5 310 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 SLITRK6Q9H5Y7 841 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 DLGAP2Q9P1A6 1054 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 ATP11BQ9Y2G3 1177 aa14.33□□□□□ -0.11
CCDC144A-203ENST00000360495 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 M0QZ92 97 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 ZNF211Q13398 564 aaPredicted RBP14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 PDXDC1Q6P996 788 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 SEC16BQ96JE7 1060 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 LBHD1Q9BQE6 289 aaPredicted RBP14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 VPS11Q9H270 941 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 ZWILCHQ9H900 591 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 GEMIN8Q9NWZ8 242 aaKnown RBP14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 TRIM49BA6NDI0 452 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 SLC4A1P02730 911 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 CHRNA3P32297 505 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 ZC3H12BQ5HYM0 836 aaKnown RBP14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 BBS5Q8N3I7 341 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 PARP3Q9Y6F1 533 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 MEIS1O00470 390 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 CD248Q9HCU0 757 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 GIMAP4Q9NUV9 329 aa14.33□□□□□ -0.12
CCDC144A-203ENST00000360495 H0Y626 953 aa14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 MED7O43513 233 aa14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 WBP4O75554 376 aaKnown RBP14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 TRIM16O95361 564 aa14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 ESRRBO95718 433 aa14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 ALAS1P13196 640 aa14.32□□□□□ -0.12
CCDC144A-203ENST00000360495 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms