RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 LRRC4Q9HBW1 653 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SESN1Q9Y6P5 492 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 EYA2O00167 538 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ITGA6P23229 1130 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 PLD3Q8IV08 490 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ADCY3O60266 1144 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 GNAT1P11488 350 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 RAB14P61106 215 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 PRKCQQ04759 706 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ARMCX5Q6P1M9 558 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SNRNP27Q8WVK2 155 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ACSBG1Q96GR2 724 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 NT5C1BQ96P26 610 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 TSSK1BQ9BXA7 367 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SEPT3Q9UH03 358 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SEC24DO94855 1032 aaPredicted RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 DARS2Q6PI48 645 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 MYO1DO94832 1006 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 OSBPP22059 807 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 NR5A1Q13285 461 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 ZNF274Q96GC6 653 aaPredicted RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 MYH11P35749 1972 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 CDK13Q14004 1512 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 COPEO14579 308 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 TRIM54Q9BYV2 358 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 PNMA3Q9UL41 463 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 MRPS25P82663 173 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 PCDHB4Q9Y5E5 795 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 LRRIQ4A6NIV6 560 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 HNRNPDLO14979 420 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 MYO9BQ13459 2157 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 GIMAP8Q8ND71 665 aaPredicted RBP14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 ADNPQ9H2P0 1102 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 SYTL2Q9HCH5 934 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 MLXIPLQ9NP71 852 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 LAMB3Q13751 1172 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 KCTD2Q14681 263 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 VSTM4Q8IW00 320 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 CYP4F11Q9HBI6 524 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 SYNJ2BP-COX16A0A087WUM0 186 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 SOX5P35711 763 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 DEPDC1Q5TB30 811 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 DPP9Q86TI2 863 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 TTC39CQ8N584 583 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 NFATC2IPQ8NCF5 419 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 COX16Q9P0S2 106 aa14.1□□□□□ -0.15
SRGAP3-201ENST00000360413 TJAP1Q5JTD0 557 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 GSPT2Q8IYD1 628 aaKnown RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 KCTD6Q8NC69 237 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 ZBTB10Q96DT7 871 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 BTBD6Q96KE9 485 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 SRPRBQ9Y5M8 271 aaKnown RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 M0R2C6 588 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 HSPD1P10809 573 aaKnown RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 SIX6OS1Q8N1H7 587 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 CDC26Q8NHZ8 85 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PCDHB8Q9UN66 801 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PODXLO00592 558 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 AARSP49588 968 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 CDR2LQ86X02 465 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 CAB39Q9Y376 341 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 SNX2O60749 519 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 KRT1P04264 644 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 TIMM10P62072 90 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 METTL22Q9BUU2 404 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 ZNF518AQ6AHZ1 1483 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 TRAPPC10P48553 1259 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 KIAA1755Q5JYT7 1200 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 MEFVO15553 781 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PJA2O43164 708 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PRDM1O75626 825 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 DEFA1P59665 94 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 DEFA3P59666 94 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PPP6R3Q5H9R7 873 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 SMYD4Q8IYR2 804 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 PKD2L2Q9NZM6 624 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 ZMYM6O95789 1325 aa14.09□□□□□ -0.15
SRGAP3-201ENST00000360413 ANKS3Q6ZW76 656 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 TEKT4Q8WW24 435 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 BRIP1Q9BX63 1249 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 C19orf44Q9H6X5 657 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 DDAH1O94760 285 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 SLC39A6Q13433 755 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 GANCQ8TET4 914 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 FOPNLQ96NB1 174 aa14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 GEMIN8Q9NWZ8 242 aaKnown RBP14.08□□□□□ -0.15
SRGAP3-201ENST00000360413 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRN2O75325 713 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 CASP10Q92851 521 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms