RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 HOXA13P31271 388 aaPredicted RBP22.63■■□□□ 1.21
TRIM3-202ENST00000359518 TBC1D22AQ8WUA7 517 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 NGLY1Q96IV0 654 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 PBKQ96KB5 322 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 TRIM51Q9BSJ1 452 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 RUSC1Q9BVN2 902 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 NOVA2Q9UNW9 492 aaKnown RBP22.63■■□□□ 1.21
TRIM3-202ENST00000359518 SPATA31C1P0DKV0 1188 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 C15orf52Q6ZUT6 534 aaKnown RBP22.63■■□□□ 1.21
TRIM3-202ENST00000359518 FRMD5Q7Z6J6 570 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 GLYCTKQ8IVS8 523 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 PLCB1Q9NQ66 1216 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 EPHA7Q15375 998 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 PCDHAC2Q9Y5I4 1007 aa22.63■■□□□ 1.21
TRIM3-202ENST00000359518 A6NNZ2 444 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 FAM86B1E9PN63 330 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 ATP2C2O75185 946 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 FAM86B2P0C5J1 330 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 TUBB8Q3ZCM7 444 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 ACTRT1Q8TDG2 376 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 SLC35C1Q96A29 364 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
TRIM3-202ENST00000359518 H0YGN5 161 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 MEIS2O14770 477 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 ZBTB39O15060 712 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 FGGP02679 453 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 GALCP54803 685 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 DHX9Q08211 1270 aaKnown RBP22.62■■□□□ 1.21
TRIM3-202ENST00000359518 ZC2HC1CQ53FD0 456 aaPredicted RBP22.62■■□□□ 1.21
TRIM3-202ENST00000359518 SIX2Q9NPC8 291 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 NFS1Q9Y697 457 aa22.62■■□□□ 1.21
TRIM3-202ENST00000359518 FRMD3A2A2Y4 597 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 EEF2P13639 858 aaKnown RBP22.61■■□□□ 1.21
TRIM3-202ENST00000359518 GUCY2CP25092 1073 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 IFI16Q16666 785 aaKnown RBP22.61■■□□□ 1.21
TRIM3-202ENST00000359518 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 CNOT8Q9UFF9 292 aaKnown RBP22.61■■□□□ 1.21
TRIM3-202ENST00000359518 TRAF3IP3Q9Y228 551 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 RGL2O15211 777 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 NMT1P30419 496 aaKnown RBP22.61■■□□□ 1.21
TRIM3-202ENST00000359518 SPIRE1Q08AE8 756 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 ZNF211Q13398 564 aaPredicted RBP22.61■■□□□ 1.21
TRIM3-202ENST00000359518 CUL1Q13616 776 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 LRRC45Q96CN5 670 aa22.61■■□□□ 1.21
TRIM3-202ENST00000359518 CHMP2AO43633 222 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 SERPINB2P05120 415 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 COG2Q14746 738 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 VPS36Q86VN1 386 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 BZW2Q9Y6E2 419 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 ASTN1O14525 1302 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 PLIN4Q96Q06 1357 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 CALUO43852 315 aaPredicted RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 BUB1BO60566 1050 aaPredicted RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 TBCAO75347 108 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 QPCTQ16769 361 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 KRT71Q3SY84 523 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 SLFN13Q68D06 897 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 CDC42EP5Q6NZY7 148 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 SYT2Q8N9I0 419 aaPredicted RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 RBM17Q96I25 401 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 ATP8A1Q9Y2Q0 1164 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 EVI5O60447 810 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 IBSPP21815 317 aaPredicted RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 MAGOHP61326 146 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 CTTNQ14247 550 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 CHADLQ6NUI6 762 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 NT5DC3Q86UY8 548 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 ZC3H3Q8IXZ2 948 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 ETNPPLQ8TBG4 499 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 MAGOHBQ96A72 148 aaKnown RBP22.6■■□□□ 1.21
TRIM3-202ENST00000359518 CYFIP2Q96F07 1278 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 PPP1R9AQ9ULJ8 1098 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 PITPNM2Q9BZ72 1349 aa22.6■■□□□ 1.21
TRIM3-202ENST00000359518 FAM107AO95990 144 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 FNTAP49354 379 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 C10orf76Q5T2E6 689 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 SLFN12Q8IYM2 578 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 RDH13Q8NBN7 331 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 LNX1Q8TBB1 728 aaPredicted RBP22.59■■□□□ 1.21
TRIM3-202ENST00000359518 GOPCQ9HD26 462 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 SMIM23A6NLE4 172 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 ERMNQ8TAM6 284 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 MDM1Q8TC05 714 aa22.59■■□□□ 1.21
TRIM3-202ENST00000359518 EML1O00423 815 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 PDXKO00764 312 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 RPA1P27694 616 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 ARHGAP44Q17R89 818 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 MCTP2Q6DN12 878 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 MICALCLQ6ZW33 695 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 SLC35G2Q8TBE7 412 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 SWAP70Q9UH65 585 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 CHORDC1Q9UHD1 332 aaPredicted RBP22.58■■□□□ 1.21
TRIM3-202ENST00000359518 IGSF9BQ9UPX0 1349 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 ZBTB48P10074 688 aaPredicted RBP22.58■■□□□ 1.21
TRIM3-202ENST00000359518 ZNF76P36508 570 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 GLG1Q92896 1179 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 DNAJC18Q9H819 358 aa22.58■■□□□ 1.21
TRIM3-202ENST00000359518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.58■■□□□ 1.21
TRIM3-202ENST00000359518 HLA-DOAP06340 250 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms