RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 KCNMA1Q12791 1236 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 SLC29A2Q14542 456 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 KLC3Q6P597 504 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 R3HDM2Q9Y2K5 976 aaKnown RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 EPHB6O15197 1021 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 IFIT1P09914 478 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 VAV1P15498 845 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 HOXD12P35452 270 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 TIMM10P62072 90 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 MGAT5Q09328 741 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 LRRC74BQ6ZQY2 392 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PDCD7Q8N8D1 485 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 SCFD2Q8WU76 684 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 DHTKD1Q96HY7 919 aaPredicted RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 AGAP3Q96P47 875 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 GOLPH3Q9H4A6 298 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 B4E1Z4 1266 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PGRMC1O00264 195 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 ITGA4P13612 1032 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 GNAT2P19087 354 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PHEXP78562 749 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 NAT14Q8WUY8 206 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 TUBGCP5Q96RT8 1024 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 KIAA1683Q9H0B3 1180 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 SUCLA2Q9P2R7 463 aaPredicted RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PASKQ96RG2 1323 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 MAGEB3O15480 346 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 HNRNPH3P31942 346 aaKnown RBP12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 GALK1P51570 392 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 ARPC5LQ9BPX5 153 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 NLRC4Q9NPP4 1024 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 PFDN4Q9NQP4 134 aa12.32□□□□□ -0.44
SEPSECS-201ENST00000358971 OPHN1O60890 802 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 RASSF2P50749 326 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 ZCWPW2Q504Y3 356 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 FIGNQ5HY92 759 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 NME8Q8N427 588 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 MYO5BQ9ULV0 1848 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 BCL9LQ86UU0 1499 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 NEO1Q92859 1461 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 TMEM247A6NEH6 219 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 PYGMP11217 842 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 PLTPP55058 493 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 NAB2Q15742 525 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 RNF43Q68DV7 783 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 MARK2Q7KZI7 788 aaKnown RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 PPP1R14BQ96C90 147 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 ERGIC2Q96RQ1 377 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 CLIC5Q9NZA1 410 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 TMEM120BA0PK00 339 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 BOLA2-SMG1P6H3BVE0 249 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 RASGRF2O14827 1237 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 KRT36O76013 467 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 NUDT17P0C025 328 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 MARK3P27448 753 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 CDK7P50613 346 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 PSMD7P51665 324 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 SULT2A1Q06520 285 aa12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 R3HDM1Q15032 1099 aaKnown RBP12.31□□□□□ -0.44
SEPSECS-201ENST00000358971 GSTA3Q16772 222 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms