RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 KCTD17Q8N5Z5 321 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 SNX29Q8TEQ0 813 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 DHX38Q92620 1227 aaKnown RBP27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 NACC1Q96RE7 527 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 CEP89Q96ST8 783 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 ANKEF1Q9NU02 776 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 TNRC18O15417 2968 aaPredicted RBP27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 PP2D1A8MPX8 630 aa27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 CAND2O75155 1236 aa27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 RAG1P15918 1043 aa27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 GRIN1Q05586 938 aa27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 KRI1Q8N9T8 703 aaKnown RBP27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 MMTAG2Q9BU76 263 aaKnown RBP27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 CYP26B1Q9NR63 512 aa27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 ZMYND8Q9ULU4 1186 aaPredicted RBP27.16■■□□□ 1.94
ALKAL1-201ENST00000358543 SMIM35A0A1B0GVV1 85 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 C22orf31O95567 290 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 SYN1P17600 705 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 ITGB8P26012 769 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 CDC25AP30304 524 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 HYIQ5T013 277 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 KCNG4Q8TDN1 519 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 WNT8BQ93098 351 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 RCOR1Q9UKL0 485 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 CEP290O15078 2479 aa27.15■■□□□ 1.94
ALKAL1-201ENST00000358543 TMEM150BA6NC51 233 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 H0YGN5 161 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 KRT85P78386 507 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 ECM1Q16610 540 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 MTERF2Q49AM1 385 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 RUFY4Q6ZNE9 571 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 EXOC8Q8IYI6 725 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 NME8Q8N427 588 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 RETREG2Q8NC44 543 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 IPO9Q96P70 1041 aaKnown RBP27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 CSRNP2Q9H175 543 aa27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 DBR1Q9UK59 544 aaKnown RBP27.14■■□□□ 1.94
ALKAL1-201ENST00000358543 KDM3AQ9Y4C1 1321 aa27.14■■□□□ 1.93
ALKAL1-201ENST00000358543 ZBTB39O15060 712 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 CKBP12277 381 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 UBA7P41226 1012 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 TBC1D8BQ0IIM8 1120 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 MFSD5Q6N075 450 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 POTEGQ6S5H5 508 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 RSPH3Q86UC2 560 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 CEP170P1Q96L14 293 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 PPP1R12CQ9BZL4 782 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 KIAA1024Q9UPX6 916 aa27.13■■□□□ 1.93
ALKAL1-201ENST00000358543 IGKV6-21A0A0C4DH24 114 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 MAFO75444 373 aaPredicted RBP27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 CYP2C18P33260 490 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 NPEPPSP55786 919 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 XKR9Q5GH70 373 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 PLA2G4FQ68DD2 849 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 CABP7Q86V35 215 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 LINC01465Q8N7H1 131 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 ZNF579Q8NAF0 562 aaKnown RBP27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 PIGOQ8TEQ8 1089 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 ZBTB10Q96DT7 871 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 CLIC6Q96NY7 704 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 JPH2Q9BR39 696 aaPredicted RBP27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 CCSER1Q9C0I3 900 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 NT5C3AQ9H0P0 336 aa27.12■■□□□ 1.93
ALKAL1-201ENST00000358543 SELPP16109 830 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 THPOP40225 353 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 RFC5P40937 340 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 RARRES1P49788 294 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 KIAA0319LQ8IZA0 1049 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 TMEM199Q8N511 208 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 DNAJB3Q8WWF6 145 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 LBHD1Q9BQE6 289 aaPredicted RBP27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 SH2D3AQ9BRG2 576 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 WNT8AQ9H1J5 351 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 DHX33Q9H6R0 707 aaKnown RBP27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 DDX19AQ9NUU7 478 aaKnown RBP27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 CHMP5Q9NZZ3 219 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 UMODL1Q5DID0 1318 aa27.11■■□□□ 1.93
ALKAL1-201ENST00000358543 PARNO95453 639 aaKnown RBP27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 IQCF3P0C7M6 154 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 TMOD1P28289 359 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 FAM26DQ5JW98 314 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 EFCAB12Q6NXP0 572 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 BADQ92934 168 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 CALML4Q96GE6 196 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 SCAND2PQ9GZW5 306 aaPredicted RBP27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 DNM3Q9UQ16 869 aa27.1■■□□□ 1.93
ALKAL1-201ENST00000358543 EVPLQ92817 2033 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 CUTAO60888 179 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 GRB10Q13322 594 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 ZNF618Q5T7W0 954 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 TRAF7Q6Q0C0 670 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 LRRC8DQ7L1W4 858 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 METTL13Q8N6R0 699 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 SLC7A3Q8WY07 619 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 CDK5RAP3Q96JB5 506 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 PNMA5Q96PV4 448 aa27.09■■□□□ 1.93
ALKAL1-201ENST00000358543 A0A087WWV3 80 aa27.08■■□□□ 1.93
ALKAL1-201ENST00000358543 GAS2O43903 313 aaKnown RBP27.08■■□□□ 1.93
ALKAL1-201ENST00000358543 DGAT1O75907 488 aa27.08■■□□□ 1.93
ALKAL1-201ENST00000358543 NCLP19338 710 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms