RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 UBE3BQ7Z3V4 1068 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 TATDN2Q93075 761 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
NF1-202ENST00000358273 RNPEPL1Q9HAU8 725 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 TMED5Q9Y3A6 229 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 AFDNP55196 1824 aaKnown RBP7.46□□□□□ -1.22
NF1-202ENST00000358273 ASXL3Q9C0F0 2248 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 SERPINB8P50452 374 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 POLR2FP61218 127 aaKnown RBP7.46□□□□□ -1.22
NF1-202ENST00000358273 SH3D19Q5HYK7 790 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 NLRP9Q7RTR0 991 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 TMEM237Q96Q45 408 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 THAP9Q9H5L6 903 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 SNRNP200O75643 2136 aaKnown RBP7.46□□□□□ -1.22
NF1-202ENST00000358273 FGGP02679 453 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 JAK1P23458 1154 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 LRRC14Q15048 493 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 CYP39A1Q9NYL5 469 aa7.46□□□□□ -1.22
NF1-202ENST00000358273 DOCK9Q9BZ29 2069 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 S100A1P23297 94 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ADAM9Q13443 819 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 DZIP3Q86Y13 1208 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 LRRC34Q8IZ02 419 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 STAMQ92783 540 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 TOPBP1Q92547 1522 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 CKAP5Q14008 2032 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ZNF174Q15697 407 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 CNPY1Q3B7I2 92 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 LRRC74BQ6ZQY2 392 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 CCDC84Q86UT8 332 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 TIMMDC1Q9NPL8 285 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 PA2G4Q9UQ80 394 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 ICE1Q9Y2F5 2266 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 CAPN15O75808 1086 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 OCM2P0CE71 109 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 OCMP0CE72 109 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 ESRRAP11474 423 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 XRCC4Q13426 336 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ZC3H12AQ5D1E8 599 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 SYT2Q8N9I0 419 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 TRNAU1APQ9NX07 287 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 ABCA6Q8N139 1617 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 PPLO60437 1756 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 LINC00854A0A1B0GVQ3 168 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 MBD4O95243 580 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 INPP1P49441 399 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 DNM2P50570 870 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 MED21Q13503 144 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 TCP11X2Q5H9J9 407 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 N4BP2Q86UW6 1770 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 ADGRB2O60241 1585 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 IDH1O75874 414 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 SEMA3DO95025 777 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 AGTP01019 485 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 FGFR4P22455 802 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 RIPK1Q13546 671 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ACAP1Q15027 740 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 LINC00301Q8NCQ3 95 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 DDHD1Q8NEL9 900 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 LRGUKQ96M69 825 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 IFT122Q9HBG6 1241 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 DDX56Q9NY93 547 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 GMEB1Q9Y692 573 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ASAP2O43150 1006 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 RPN1P04843 607 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 KLHL30Q0D2K2 578 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 TOB2Q14106 344 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 B3GNT6Q6ZMB0 384 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 TMBIM4Q9HC24 238 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ADCY8P40145 1251 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 RNF19BQ6ZMZ0 732 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 CTAGE3PQ8IX95 158 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ZBTB8BQ8NAP8 495 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 PPWD1Q96BP3 646 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 CALML4Q96GE6 196 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 PANK4Q9NVE7 773 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 RNF14Q9UBS8 474 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 RSPH3Q86UC2 560 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ANKRD26Q9UPS8 1709 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 ABCC1P33527 1531 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 AP3B1O00203 1094 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 SEC24DO94855 1032 aaPredicted RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 AP1B1Q10567 949 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 TRIP10Q15642 601 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
NF1-202ENST00000358273 KNDC1Q76NI1 1749 aa7.45□□□□□ -1.22
NF1-202ENST00000358273 A1BGP04217 495 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 CYP11B2P19099 503 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 SERPINB1P30740 379 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 HSD17B3P37058 310 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 EZH2Q15910 746 aaKnown RBP7.44□□□□□ -1.22
NF1-202ENST00000358273 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
NF1-202ENST00000358273 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 NLRP7Q8WX94 980 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 UNC13BO14795 1591 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 TRPM2O94759 1503 aa7.44□□□□□ -1.22
NF1-202ENST00000358273 RTL9Q8NET4 1388 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms