RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ITKQ08881 620 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 MMEL1Q495T6 779 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 CAPN12Q6ZSI9 719 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
COL9A1-202ENST00000357250 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 MAP2P11137 1827 aaKnown RBP12.64□□□□□ -0.39
COL9A1-202ENST00000357250 CPDO75976 1380 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 KRT10P13645 584 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ANXA13P27216 316 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 IFNAR2P48551 515 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-202ENST00000357250 LRGUKQ96M69 825 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 SUGT1Q9Y2Z0 365 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 UTYO14607 1347 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 EXOC1LA0A1B0GW35 172 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TJP3O95049 919 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TFAMQ00059 246 aaKnown RBP12.64□□□□□ -0.39
COL9A1-202ENST00000357250 KRT76Q01546 638 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 TFDP2Q14188 446 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 NFIXQ14938 502 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ANKRD20A8PQ5CZ79 823 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ANKRD20A2Q5SQ80 823 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ANKRD20A1Q5TYW2 823 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 XXYLT1Q8NBI6 393 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 RAD54LQ92698 747 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
COL9A1-202ENST00000357250 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 BAG2O95816 211 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 CYP27A1Q02318 531 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 KCNB1Q14721 858 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 ABCB6Q9NP58 842 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 MEIS1O00470 390 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 ACTN1P12814 892 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 SFNP31947 248 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 PRELPP51888 382 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 SNAP25P60880 206 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 DARS2Q6PI48 645 aaKnown RBP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 PCIF1Q9H4Z3 704 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 ABCB11O95342 1321 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 F8W8V4 182 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 UBE2SQ16763 222 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 JADE1Q6IE81 842 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 CYP4F22Q6NT55 531 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 RSRC2Q7L4I2 434 aaKnown RBP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 KCTD6Q8NC69 237 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 TTC25Q96NG3 672 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
COL9A1-202ENST00000357250 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 PFASO15067 1338 aa12.63□□□□□ -0.39
COL9A1-202ENST00000357250 C21orf2O43822 256 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 SETSIPP0DME0 302 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ENAHQ8N8S7 591 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 TMEM35BQ8NCS4 154 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 PLA2G12BQ9BX93 195 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 DRC3Q9H069 523 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 PCDHA6Q9UN73 950 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 PCDHA8Q9Y5H6 950 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 MROH1Q8NDA8 1641 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 OPHN1O60890 802 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ATP5HO75947 161 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 KRT37O76014 449 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 CDC27P30260 824 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 IGBP1P78318 339 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 GPC5P78333 572 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 TMED2Q15363 201 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ARL13BQ3SXY8 428 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 NAALADL2Q58DX5 795 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms