RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 RSPH3Q86UC2 560 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 DNAJC9Q8WXX5 260 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 CNOT6LQ96LI5 555 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 NDST4Q9H3R1 872 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 A1CFQ9NQ94 594 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 CDY2AQ9Y6F7 541 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 CDY1Q9Y6F8 540 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 RNMTO43148 476 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ADCY3O60266 1144 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 S100BP04271 92 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 PCSK2P16519 638 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 MFN1Q8IWA4 741 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ZCRB1Q8TBF4 217 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 UVRAGQ9P2Y5 699 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 A8MXQ7 604 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ALPK2Q86TB3 2170 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 B4E1Z4 1266 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 FGGP02679 453 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 MED21Q13503 144 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 RBM43Q6ZSC3 357 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 DGKHQ86XP1 1220 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 CXorf38Q8TB03 319 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 SNF8Q96H20 258 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 NACC1Q96RE7 527 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ING2Q9H160 280 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ZMYND8Q9ULU4 1186 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 CD2APQ9Y5K6 639 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 A0A1W2PQJ5 194 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 DIAPH2O60879 1101 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 EFCAB14O75071 495 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 ABCE1P61221 599 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 C16orf89Q6UX73 402 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 KDM7AQ6ZMT4 941 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 PPP1R14BQ96C90 147 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 SUFUQ9UMX1 484 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 MMP1P03956 469 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 PCDHA12Q9UN75 941 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 HAUS5O94927 633 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 AP3M2P53677 418 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 KBTBD12Q3ZCT8 623 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 STX19Q8N4C7 294 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 HESX1Q9UBX0 185 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 TFDP2Q14188 446 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 TMEM259Q4ZIN3 620 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 DDX54Q8TDD1 881 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 PYROXD1Q8WU10 500 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 AZI2Q9H6S1 392 aa7.03□□□□□ -1.28
VPS13B-202ENST00000357162 MRPL11Q9Y3B7 192 aaKnown RBP7.03□□□□□ -1.28
VPS13B-202ENST00000357162 XPO1O14980 1071 aaKnown RBP7.02□□□□□ -1.28
VPS13B-202ENST00000357162 DAPK3O43293 454 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 PSMA4P25789 261 aaKnown RBP7.02□□□□□ -1.28
VPS13B-202ENST00000357162 LSP1P33241 339 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 AARSP49588 968 aaKnown RBP eCLIP7.02□□□□□ -1.28
VPS13B-202ENST00000357162 POLE2P56282 527 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 FAM133BQ5BKY9 247 aaKnown RBP7.02□□□□□ -1.28
VPS13B-202ENST00000357162 PASD1Q8IV76 773 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 MYCT1Q8N699 235 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 XAGE2Q96GT9 111 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 SNRKQ9NRH2 765 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 CAPN11Q9UMQ6 739 aa7.02□□□□□ -1.28
VPS13B-202ENST00000357162 MAGI2Q86UL8 1455 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 USP42Q9H9J4 1324 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 VGLL3A8MV65 326 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 BACH1O14867 736 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 DDX56Q9NY93 547 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PITPNM2Q9BZ72 1349 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 CAPRIN1Q14444 709 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 INPP5AQ14642 412 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ALKBH5Q6P6C2 394 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SGMS1Q86VZ5 419 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PALMDQ9NP74 551 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 DISC1Q9NRI5 854 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PANK4Q9NVE7 773 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ADGRG1Q9Y653 693 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 CCT8L1PA6NM43 557 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SERPINB3P29508 390 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 BLVRAP53004 296 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PLTPP55058 493 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 OTUB1Q96FW1 271 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SORCS3Q9UPU3 1222 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TBKBP1A7MCY6 615 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TMEM110-MUSTN1A8MSY1 372 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 CYP2E1P05181 493 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ZBTB18Q99592 522 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TMEM247A6NEH6 219 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 FAM47DPA6NHR8 397 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PDE6AP16499 860 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 S100A5P33763 92 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 MXI1P50539 228 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 YWHAGP61981 247 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NUGGCQ68CJ6 796 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms