RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 PYGBP11216 843 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
RXRA-201ENST00000356384 LINC00301Q8NCQ3 95 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 KIFC3Q9BVG8 833 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 PLAAQ9Y263 795 aa17.23■□□□□ 0.35
RXRA-201ENST00000356384 STAT2P52630 851 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 FLOT2Q14254 428 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 ZNF589Q86UQ0 364 aaPredicted RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 MSTO1Q9BUK6 570 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 EDEM3Q9BZQ6 932 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 TRPV6Q9H1D0 765 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 KRT37O76014 449 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 HADHAP40939 763 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 MDM2Q00987 491 aaPredicted RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 SYDE2Q5VT97 1194 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 OR6B3Q8NGW1 331 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 DACH2Q96NX9 599 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 TRIM55Q9BYV6 548 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 GYG2O15488 501 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 DCTN3O75935 186 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 ANP32DO95626 131 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 MYL1P05976 194 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 PSAPP07602 524 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 MARK3P27448 753 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 OCA2Q04671 838 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 CTTNQ14247 550 aaKnown RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 WDR75Q8IWA0 830 aaKnown RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
RXRA-201ENST00000356384 YY1AP1Q9H869 796 aa17.22■□□□□ 0.35
RXRA-201ENST00000356384 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 PRKAB2O43741 272 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 PAMP19021 973 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 ELF1P32519 619 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 ABCD1P33897 745 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 DAB2P98082 770 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 KCNA1Q09470 495 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 DRP2Q13474 957 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 ING2Q9H160 280 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 PYGLP06737 847 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 KITP10721 976 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 CUL1Q13616 776 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 SPARCL1Q14515 664 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 GRAMD4Q6IC98 578 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 KLC2Q9H0B6 622 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 ADAMTS1Q9UHI8 967 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 SNX2O60749 519 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 MMEP08473 750 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 ALKBH5Q6P6C2 394 aaKnown RBP17.21■□□□□ 0.35
RXRA-201ENST00000356384 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 PAPOLAP51003 745 aaKnown RBP17.21■□□□□ 0.35
RXRA-201ENST00000356384 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 FAM47EQ6ZV65 393 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 BZW1Q7L1Q6 419 aaKnown RBP17.21■□□□□ 0.35
RXRA-201ENST00000356384 TSC22D3Q99576 134 aa17.21■□□□□ 0.35
RXRA-201ENST00000356384 APOBEC2Q9Y235 224 aaKnown RBP17.21■□□□□ 0.35
RXRA-201ENST00000356384 PSMD2Q13200 908 aa17.21■□□□□ 0.34
RXRA-201ENST00000356384 C16orf87Q6PH81 154 aa17.21■□□□□ 0.34
RXRA-201ENST00000356384 UNC5CLQ8IV45 518 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
RXRA-201ENST00000356384 TJP3O95049 919 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 HLA-DPA1P20036 260 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 FBXW4P57775 412 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 NOP53Q9NZM5 478 aaKnown RBP17.2■□□□□ 0.34
RXRA-201ENST00000356384 PRKAG2Q9UGJ0 569 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 SURF1Q15526 300 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 LZICQ8WZA0 190 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
RXRA-201ENST00000356384 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 KLHL8Q9P2G9 620 aaPredicted RBP17.2■□□□□ 0.34
RXRA-201ENST00000356384 SNX24Q9Y343 169 aa17.2■□□□□ 0.34
RXRA-201ENST00000356384 BLVRAP53004 296 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 NDUFAF2Q8N183 169 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 LEMD3Q9Y2U8 911 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 SFI1A8K8P3 1242 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
RXRA-201ENST00000356384 LCORLQ8N3X6 602 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
RXRA-201ENST00000356384 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms