RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 AMPD3Q01432 767 aa26.77■■□□□ 1.88
CHKA-202ENST00000356135 BMP2KQ9NSY1 1161 aaPredicted RBP26.77■■□□□ 1.88
CHKA-202ENST00000356135 ANKEF1Q9NU02 776 aa26.77■■□□□ 1.88
CHKA-202ENST00000356135 HOXD8P13378 290 aaPredicted RBP26.76■■□□□ 1.88
CHKA-202ENST00000356135 GJA9P57773 515 aa26.76■■□□□ 1.88
CHKA-202ENST00000356135 PLCB4Q15147 1175 aa26.76■■□□□ 1.88
CHKA-202ENST00000356135 FSCN1Q16658 493 aaKnown RBP26.76■■□□□ 1.88
CHKA-202ENST00000356135 SMARCE1Q969G3 411 aa26.76■■□□□ 1.88
CHKA-202ENST00000356135 CEP170P1Q96L14 293 aa26.76■■□□□ 1.88
CHKA-202ENST00000356135 HMX1Q9NP08 348 aaPredicted RBP26.76■■□□□ 1.88
CHKA-202ENST00000356135 XPNPEP3Q9NQH7 507 aa26.76■■□□□ 1.88
CHKA-202ENST00000356135 DDX20Q9UHI6 824 aaKnown RBP26.76■■□□□ 1.88
CHKA-202ENST00000356135 SARSP49591 514 aaKnown RBP26.76■■□□□ 1.87
CHKA-202ENST00000356135 CPT1AP50416 773 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 MTERF2Q49AM1 385 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 PADI6Q6TGC4 694 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 SASS6Q6UVJ0 657 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 C1orf186Q6ZWK4 172 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 OTUD6AQ7L8S5 288 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 TUBE1Q9UJT0 475 aa26.76■■□□□ 1.87
CHKA-202ENST00000356135 MYCNP04198 464 aaPredicted RBP26.75■■□□□ 1.87
CHKA-202ENST00000356135 MYL3P08590 195 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 ASIC1P78348 528 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 MAEAQ7L5Y9 396 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 SPATA20Q8TB22 786 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 PPP1R13LQ8WUF5 828 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 DNAJC19Q96DA6 116 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 ERAP1Q9NZ08 941 aa26.75■■□□□ 1.87
CHKA-202ENST00000356135 H3BRB1 525 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 KLRC4O43908 158 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 MYH9P35579 1960 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 SLC9C1Q4G0N8 1177 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 GNASQ5JWF2 1037 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 CTU1Q7Z7A3 348 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 CCDC43Q96MW1 224 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 TUT1Q9H6E5 874 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 NRBP2Q9NSY0 501 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 MAN1B1Q9UKM7 699 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 USO1O60763 962 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 ADAMTS4O75173 837 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 RPN1P04843 607 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 KRT18P05783 430 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 CHMP4BP1P59074 171 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 GIT2Q14161 759 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 ATP8B4Q8TF62 1192 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 NIFKQ9BYG3 293 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 LRRC27Q9C0I9 530 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 UPF3AQ9H1J1 476 aaKnown RBP26.74■■□□□ 1.87
CHKA-202ENST00000356135 CYP26B1Q9NR63 512 aa26.74■■□□□ 1.87
CHKA-202ENST00000356135 SMC2O95347 1197 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 IDEP14735 1019 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 NT5DC1Q5TFE4 455 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 RNF214Q8ND24 703 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 KAT2BQ92831 832 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 REEP2Q9BRK0 252 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 UNC93B1Q9H1C4 597 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 TRPC6Q9Y210 931 aa26.73■■□□□ 1.87
CHKA-202ENST00000356135 RSPH10B2B2RC85 870 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 MYL1P05976 194 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 RSPH10BP0C881 870 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 MTFR1Q15390 333 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 KMT5BQ4FZB7 885 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 BRDTQ58F21 947 aaPredicted RBP26.72■■□□□ 1.87
CHKA-202ENST00000356135 LHX8Q68G74 356 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 BBXQ8WY36 941 aaPredicted RBP26.72■■□□□ 1.87
CHKA-202ENST00000356135 HPS3Q969F9 1004 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 SPC25Q9HBM1 224 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 BRCA2P51587 3418 aa26.72■■□□□ 1.87
CHKA-202ENST00000356135 SFI1A8K8P3 1242 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 SLC26A2P50443 739 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 TRAPPC12Q8WVT3 735 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 CEP89Q96ST8 783 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 CAVIN2O95810 425 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 BMP6P22004 513 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 TARBP2Q15633 366 aaKnown RBP26.71■■□□□ 1.87
CHKA-202ENST00000356135 ZBTB10Q96DT7 871 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 FAM167AQ96KS9 214 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.71■■□□□ 1.872e-6■■■□□ 16.1
CHKA-202ENST00000356135 ZHX3Q9H4I2 956 aa26.71■■□□□ 1.87
CHKA-202ENST00000356135 ZNF215Q9UL58 517 aaPredicted RBP26.71■■□□□ 1.87
CHKA-202ENST00000356135 ZBTB42B2RXF5 422 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 SOX10P56693 466 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 PURAQ00577 322 aaKnown RBP26.7■■□□□ 1.86
CHKA-202ENST00000356135 STX1AQ16623 288 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 UVSSAQ2YD98 709 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 CNNM4Q6P4Q7 775 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 KLHDC9Q8NEP7 349 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 GSDMAQ96QA5 445 aa26.7■■□□□ 1.86
CHKA-202ENST00000356135 F2P00734 622 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 NKX3-2P78367 333 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 UNC13DQ70J99 1090 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 FAM200AQ8TCP9 573 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 GPRC5CQ9NQ84 441 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 PANK4Q9NVE7 773 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 HBP1O60381 514 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 INSRRP14616 1297 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 IGBP1P78318 339 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 KCNA10Q16322 511 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 ANO6Q4KMQ2 910 aa26.69■■□□□ 1.86
CHKA-202ENST00000356135 CXCL17Q6UXB2 119 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms