RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SEPT2Q15019 361 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
COLCA1-201ENST00000355430 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 SERPINA10Q9UK55 444 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
COLCA1-201ENST00000355430 KCNB1Q14721 858 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 C10orf76Q5T2E6 689 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 CCDC13Q8IYE1 715 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 SMC6Q96SB8 1091 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 EPHX2P34913 555 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 VPS37BQ9H9H4 285 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 HPCAL4Q9UM19 191 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
COLCA1-201ENST00000355430 CD19P15391 556 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 KLK7P49862 253 aa13.34□□□□□ -0.27
COLCA1-201ENST00000355430 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
COLCA1-201ENST00000355430 MAK16Q9BXY0 300 aaKnown RBP13.34□□□□□ -0.27
COLCA1-201ENST00000355430 ASB14A6NK59 587 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 CTNND1O60716 968 aaKnown RBP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 NTSR2O95665 410 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ERVK-24P63145 666 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ALKBH5Q6P6C2 394 aaKnown RBP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 PPM1KQ8N3J5 372 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SPATA4Q8NEY3 305 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 MAIP1Q8WWC4 291 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ORC4O43929 436 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ENTPD3O75355 529 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 COASYQ13057 564 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 TTLL4Q14679 1199 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 KBTBD13C9JR72 458 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 THAP12O43422 761 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SRGNP10124 158 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 CUL1Q13616 776 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 E2F5Q15329 346 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 STMN2Q93045 179 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ZNF70Q9UC06 446 aaPredicted RBP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
COLCA1-201ENST00000355430 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
COLCA1-201ENST00000355430 LLGL1Q15334 1064 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 FRMD3A2A2Y4 597 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 SLC8A1P32418 973 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 ICE2Q659A1 982 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 ARHGEF2Q92974 986 aaKnown RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PSMD1Q99460 953 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 VIPAS39Q9H9C1 493 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PVALEFA0A1B0GWK0 134 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 E9PMD0 336 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PDE6CP51160 858 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 BIRC2Q13490 618 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 ABCB11O95342 1321 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 CCL15-CCL14A0A0B4J2E2 113 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 ZBBXA8MT70 800 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 DAPK3O43293 454 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 CCL15Q16663 113 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 PDXDC1Q6P996 788 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 MS4A14Q96JA4 679 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
COLCA1-201ENST00000355430 RNF146Q9NTX7 359 aa13.32□□□□□ -0.28
COLCA1-201ENST00000355430 INO80B-WBP1J3KQ70 363 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 DR1Q01658 176 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 NSMCE1Q8WV22 266 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 CCDC127Q96BQ5 260 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
COLCA1-201ENST00000355430 TNS2Q63HR2 1409 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 FGGP02679 453 aa13.31□□□□□ -0.28
COLCA1-201ENST00000355430 FAM133BQ5BKY9 247 aaKnown RBP13.31□□□□□ -0.28
COLCA1-201ENST00000355430 CCNI2Q6ZMN8 369 aaPredicted RBP13.31□□□□□ -0.28
COLCA1-201ENST00000355430 FMO2Q99518 471 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms