RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 FIZ1Q96SL8 496 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 NOC4LQ9BVI4 516 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 KCND1Q9NSA2 647 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 TYW1Q9NV66 732 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 PLXNA1Q9UIW2 1896 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 SFI1A8K8P3 1242 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 CALUO43852 315 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 PRPF6O94906 941 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 STBD1O95210 358 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 SUPT20HL2P0C7V6 817 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 MAN2A1Q16706 1144 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 MIIPQ5JXC2 388 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 ZNF720Q7Z2F6 126 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 DAW1Q8N136 415 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 BCAS3Q9H6U6 928 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 SOCS7O14512 581 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 TPM1P09493 284 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 NEDD9Q14511 834 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 NFIL3Q16649 462 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 XKR9Q5GH70 373 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 FAM178BQ8IXR5 827 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 CCDC51Q96ER9 411 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 PANX2Q96RD6 677 aa25.21■■□□□ 1.63
SCAMP3-202ENST00000355379 BACH1O14867 736 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 PGK2P07205 417 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 MKRN3Q13064 507 aaKnown RBP25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 ALCAMQ13740 583 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 VWA3BQ502W6 1294 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 ODR4Q5SWX8 454 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 SWSAP1Q6NVH7 229 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 CYFIP1Q7L576 1253 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 ABRAQ8N0Z2 381 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 EEF2KMTQ96G04 330 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 STRA6Q9BX79 667 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 PORCNQ9H237 461 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 LARSQ9P2J5 1176 aaKnown RBP25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 PCDHB13Q9Y5F0 798 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 IGSF9BQ9UPX0 1349 aa25.2■■□□□ 1.62
SCAMP3-202ENST00000355379 CETN3O15182 167 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 ZNF862O60290 1169 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 UBA1P22314 1058 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 NMT1P30419 496 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 RBL2Q08999 1139 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 ANO5Q75V66 913 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 CNGA4Q8IV77 575 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 DRC1Q96MC2 740 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 ERGIC2Q96RQ1 377 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 PARK7Q99497 189 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 EFCC1Q9HA90 598 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 POLD4Q9HCU8 107 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 SYNGAP1Q96PV0 1343 aa25.19■■□□□ 1.62
SCAMP3-202ENST00000355379 IGKV6D-21A0A0A0MT36 114 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 USO1O60763 962 aaKnown RBP25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 GYPCP04921 128 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 TBC1D8BQ0IIM8 1120 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 ADAM9Q13443 819 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 FKBP15Q5T1M5 1219 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 WDR78Q5VTH9 848 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 TMEM139Q8IV31 216 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 CCDC60Q8IWA6 550 aaPredicted RBP25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 C17orf53Q8N3J3 647 aaPredicted RBP25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 NUP58Q9BVL2 599 aa25.18■■□□□ 1.62
SCAMP3-202ENST00000355379 ASB14A6NK59 587 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 STRNO43815 780 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 STX10O60499 249 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 MFAP3LO75121 409 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 PPP1R37O75864 691 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 FARP2O94887 1054 aaPredicted RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 PLS3P13797 630 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 ADKP55263 362 aaKnown RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 CEP135Q66GS9 1140 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 ANKRD13CQ8N6S4 541 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 SLC17A8Q8NDX2 589 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 IQCDQ96DY2 449 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 NDST4Q9H3R1 872 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 MAFBQ9Y5Q3 323 aaPredicted RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 PES1O00541 588 aaKnown RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 RPL13P26373 211 aaKnown RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 CCDC40Q4G0X9 1142 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 XKR3Q5GH77 459 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 UTP14CQ5TAP6 766 aaKnown RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 PLA2G4FQ68DD2 849 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 RETREG2Q8NC44 543 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 BAG1Q99933 345 aaPredicted RBP25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 ST6GALNAC4Q9H4F1 302 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 ZNF302Q9NR11 478 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 TELO2Q9Y4R8 837 aa25.17■■□□□ 1.62
SCAMP3-202ENST00000355379 ARHGAP6O43182 974 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 MCM3APO60318 1980 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 OFD1O75665 1012 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 NR2F2P24468 414 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 NPEPPSP55786 919 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 HUNKP57058 714 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 PRKCEQ02156 737 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 GOLGA8FQ08AF8 430 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 GOLGA8DPQ0D2H9 430 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 ZNF792Q3KQV3 632 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 PTPN18Q99952 460 aa25.16■■□□□ 1.62
SCAMP3-202ENST00000355379 NAA15Q9BXJ9 866 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms