RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HHIPL1Q96JK4 782 aa22.72■■□□□ 1.23
TRIM4-202ENST00000354241 CTAGE1Q96RT6 745 aa22.72■■□□□ 1.23
TRIM4-202ENST00000354241 ZIC5Q96T25 663 aa22.72■■□□□ 1.23
TRIM4-202ENST00000354241 OLFML3Q9NRN5 406 aa22.72■■□□□ 1.23
TRIM4-202ENST00000354241 MAGEC2Q9UBF1 373 aaPredicted RBP22.72■■□□□ 1.23
TRIM4-202ENST00000354241 STBD1O95210 358 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 TXNP10599 105 aaKnown RBP22.71■■□□□ 1.23
TRIM4-202ENST00000354241 ZNF131P52739 623 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 KRT31Q15323 416 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CYP4F22Q6NT55 531 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CCDC62Q6P9F0 684 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 C17orf99Q6UX52 265 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 APTXQ7Z2E3 356 aaKnown RBP22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CCDC186Q7Z3E2 898 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 FILIP1Q7Z7B0 1213 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 IRF2BP1Q8IU81 584 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 MAML3Q96JK9 1138 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CEP170P1Q96L14 293 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 INTS13Q9NVM9 706 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.71■■□□□ 1.23
TRIM4-202ENST00000354241 SEL1LQ9UBV2 794 aa22.71■■□□□ 1.23
TRIM4-202ENST00000354241 LIMA1Q9UHB6 759 aaKnown RBP22.71■■□□□ 1.23
TRIM4-202ENST00000354241 MAPK7Q13164 816 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 CCDC144BQ3MJ40 725 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 FILIP1LQ4L180 1135 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 ODR4Q5SWX8 454 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 DHX37Q8IY37 1157 aaKnown RBP22.7■■□□□ 1.23
TRIM4-202ENST00000354241 SCFD2Q8WU76 684 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 SEPT1Q8WYJ6 367 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 VTA1Q9NP79 307 aa22.7■■□□□ 1.23
TRIM4-202ENST00000354241 DIS3Q9Y2L1 958 aaKnown RBP22.7■■□□□ 1.23
TRIM4-202ENST00000354241 MAFBQ9Y5Q3 323 aaPredicted RBP22.7■■□□□ 1.23
TRIM4-202ENST00000354241 DOCK3Q8IZD9 2030 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 A0A1B0GTH6 734 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 PRPF6O94906 941 aaKnown RBP22.7■■□□□ 1.22
TRIM4-202ENST00000354241 PTGS1P23219 599 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 NMT1P30419 496 aaKnown RBP22.7■■□□□ 1.22
TRIM4-202ENST00000354241 TCF7P36402 384 aaPredicted RBP22.7■■□□□ 1.22
TRIM4-202ENST00000354241 CRHR2Q13324 411 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 PTPN21Q16825 1174 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 XKR3Q5GH77 459 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 EPM2AIP1Q7L775 607 aaPredicted RBP22.7■■□□□ 1.22
TRIM4-202ENST00000354241 FAM114A1Q8IWE2 563 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 DAW1Q8N136 415 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 NPLOC4Q8TAT6 608 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 COPS5Q92905 334 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 SLC5A4Q9NY91 659 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 TAB2Q9NYJ8 693 aa22.7■■□□□ 1.22
TRIM4-202ENST00000354241 IGKV6D-21A0A0A0MT36 114 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 NOP56O00567 594 aaKnown RBP22.69■■□□□ 1.22
TRIM4-202ENST00000354241 EEF1GP26641 437 aaKnown RBP22.69■■□□□ 1.22
TRIM4-202ENST00000354241 TMEM63BQ5T3F8 832 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 FAM160B1Q5W0V3 765 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 FAM178BQ8IXR5 827 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 ZNF830Q96NB3 372 aaPredicted RBP22.69■■□□□ 1.22
TRIM4-202ENST00000354241 TIPINQ9BVW5 301 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 TM4SF4P48230 202 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 COPB1P53618 953 aaKnown RBP22.69■■□□□ 1.22
TRIM4-202ENST00000354241 NR1I3Q14994 352 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 TAPT1Q6NXT6 567 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 MAMDC4Q6UXC1 1216 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 CNOT6LQ96LI5 555 aaKnown RBP22.69■■□□□ 1.22
TRIM4-202ENST00000354241 SPATA33Q96N06 139 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 PCYT2Q99447 389 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 VPS16Q9H269 839 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 KCTD10Q9H3F6 313 aa22.69■■□□□ 1.22
TRIM4-202ENST00000354241 FGFR1OPO95684 399 aaKnown RBP22.68■■□□□ 1.22
TRIM4-202ENST00000354241 OATP04181 439 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 ATP4AP20648 1035 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 HSDL1Q3SXM5 330 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 ZCWPW2Q504Y3 356 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 FAM102BQ5T8I3 360 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 VSTM4Q8IW00 320 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 GPR20Q99678 358 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 CYP26B1Q9NR63 512 aa22.68■■□□□ 1.22
TRIM4-202ENST00000354241 SNAI1O95863 264 aaPredicted RBP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 STAT5BP51692 787 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 KNOP1Q1ED39 458 aaKnown RBP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 MTERF2Q49AM1 385 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 MORN1Q5T089 497 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 FOXR2Q6PJQ5 311 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 ZNF507Q8TCN5 953 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 DRC1Q96MC2 740 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 FIZ1Q96SL8 496 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 TINF2Q9BSI4 451 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 GPRC5CQ9NQ84 441 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 LARSQ9P2J5 1176 aaKnown RBP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 IMPACTQ9P2X3 320 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 N4BP3O15049 544 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 EIF3DO15371 548 aaKnown RBP eCLIP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 TEX33O43247 280 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 MAP2K5Q13163 448 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 BMT2Q1RMZ1 405 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 ZC2HC1CQ53FD0 456 aaPredicted RBP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 AZI2Q9H6S1 392 aa22.67■■□□□ 1.22
TRIM4-202ENST00000354241 RTN4Q9NQC3 1192 aaKnown RBP22.67■■□□□ 1.22
TRIM4-202ENST00000354241 LRRC10BA6NIK2 292 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms