RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.78■■□□□ 1.88
CPNE1-202ENST00000352393 CCDC188H7C350 402 aa26.78■■□□□ 1.88
CPNE1-202ENST00000352393 INPP5BP32019 993 aa26.78■■□□□ 1.88
CPNE1-202ENST00000352393 MDH1P40925 334 aaKnown RBP26.78■■□□□ 1.88
CPNE1-202ENST00000352393 NAA35Q5VZE5 725 aa26.78■■□□□ 1.88
CPNE1-202ENST00000352393 DNAJC18Q9H819 358 aa26.78■■□□□ 1.88
CPNE1-202ENST00000352393 SUCLA2Q9P2R7 463 aaPredicted RBP26.78■■□□□ 1.88
CPNE1-202ENST00000352393 INTUQ9ULD6 942 aa26.78■■□□□ 1.88
CPNE1-202ENST00000352393 SLURP2P0DP57 97 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 AP1M1Q9BXS5 423 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 NEUROG2Q9H2A3 272 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 GCNT4Q9P109 453 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 GTPBP10A4D1E9 387 aaKnown RBP26.77■■□□□ 1.88
CPNE1-202ENST00000352393 SART1O43290 800 aaKnown RBP26.77■■□□□ 1.88
CPNE1-202ENST00000352393 H2AFZP0C0S5 128 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 H2AFVQ71UI9 128 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 OLIG1Q8TAK6 271 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 MKL1Q969V6 931 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 LRRC45Q96CN5 670 aa26.77■■□□□ 1.88
CPNE1-202ENST00000352393 RSPH10B2B2RC85 870 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 DDX3XO00571 662 aaKnown RBP eCLIP26.76■■□□□ 1.871e-13■■■□□ 15.3
CPNE1-202ENST00000352393 RIMBP2O15034 1052 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 RSPH10BP0C881 870 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 CASP4P49662 377 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 MCTP2Q6DN12 878 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 PEX26Q7Z412 305 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 VPS36Q86VN1 386 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 STK24Q9Y6E0 443 aa26.76■■□□□ 1.87
CPNE1-202ENST00000352393 UBAP1LF5GYI3 381 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 RPL13P26373 211 aaKnown RBP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 NPEPPSP55786 919 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 PTPROQ16827 1216 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 MMS22LQ6ZRQ5 1243 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 DDX42Q86XP3 938 aaKnown RBP eCLIP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 SUGP1Q8IWZ8 645 aaKnown RBP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 ZNF473Q8WTR7 871 aaKnown RBP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 LMBR1Q8WVP7 490 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 DDX47Q9H0S4 455 aaKnown RBP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 GOLGA6L10A6NI86 522 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 FAM86B1E9PN63 330 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 FAM86B2P0C5J1 330 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 EEF2P13639 858 aaKnown RBP26.75■■□□□ 1.87
CPNE1-202ENST00000352393 SREBF1P36956 1147 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 SCNN1DP51172 638 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 NFIAQ12857 509 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 TCERG1LQ5VWI1 586 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 SLFN13Q68D06 897 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 FAM20AQ96MK3 541 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 RUSC1Q9BVN2 902 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 SLITRK6Q9H5Y7 841 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 VAV3Q9UKW4 847 aa26.75■■□□□ 1.87
CPNE1-202ENST00000352393 ZNF844Q08AG5 666 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 APOBEC3HQ6NTF7 200 aaKnown RBP26.74■■□□□ 1.87
CPNE1-202ENST00000352393 GJB7Q6PEY0 223 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 NT5DC3Q86UY8 548 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 SYCE1Q8N0S2 351 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 MYCBPAPQ8TBZ2 947 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 BORCS6Q96GS4 357 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 LRRC4BQ9NT99 713 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 NYAP2Q9P242 653 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 USP21Q9UK80 565 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 NRXN2Q9P2S2 1712 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 TMCO5BA8MYB1 307 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 KRIT1O00522 736 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 PPEF1O14829 653 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-202ENST00000352393 MEFVO15553 781 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-202ENST00000352393 FERP16591 822 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 HHIPL2Q6UWX4 724 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 NLRP14Q86W24 1093 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 SP8Q8IXZ3 490 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 HES6Q96HZ4 224 aa26.74■■□□□ 1.87
CPNE1-202ENST00000352393 ZMYM2Q9UBW7 1377 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 NCANO14594 1321 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 KLRG2A4D1S0 409 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-202ENST00000352393 GCOM1H8Y6P7 765 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-202ENST00000352393 TBCAO75347 108 aaKnown RBP26.73■■□□□ 1.87
CPNE1-202ENST00000352393 GFPT2O94808 682 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 MYZAPP0CAP1 466 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 SHROOM1Q2M3G4 852 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-202ENST00000352393 ARFGAP2Q8N6H7 521 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 SEC14L1Q92503 715 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 OLFML3Q9NRN5 406 aa26.73■■□□□ 1.87
CPNE1-202ENST00000352393 GCNT3O95395 438 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 ITGA4P13612 1032 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 YTHDF3Q7Z739 585 aaKnown RBP26.72■■□□□ 1.87
CPNE1-202ENST00000352393 ZFPM1Q8IX07 1006 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 AMNQ9BXJ7 453 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 BHMT2Q9H2M3 363 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 BCAS3Q9H6U6 928 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 MSH4O15457 936 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 TGFB1I1O43294 461 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 RAD21O60216 631 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 KIAA0754O94854 1291 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 EYA4O95677 639 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 CIITAP33076 1130 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 MMP14P50281 582 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 DDR1Q08345 913 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 KCNA1Q09470 495 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 MICALCLQ6ZW33 695 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 OR2W6PQ8NHA6 318 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms