RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
CHRNA1-202ENST00000348749 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 GPR75-ASB3A0A0A6YYF3 556 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 ESYT2A0FGR8 921 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 O00370 1275 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 EVI5O60447 810 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 TLR2O60603 784 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 MSH2P43246 934 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 CRKLP46109 303 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 PDE6CP51160 858 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 SNX1Q13596 522 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 INF2Q27J81 1249 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 C12orf60Q5U649 245 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 SV2BQ7L1I2 683 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 LRRC15Q8TF66 581 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 PRCCQ92733 491 aaPredicted RBP11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 KLHL29Q96CT2 875 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 PLCD4Q9BRC7 762 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 ZNF287Q9HBT7 754 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 INTS9Q9NV88 658 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
CHRNA1-202ENST00000348749 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 CCDC169A6NNP5 214 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 CEP104O60308 925 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 NMT2O60551 498 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 AGTP01019 485 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 GNAT1P11488 350 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 FCER1AP12319 257 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 VEGFAP15692 232 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 CNGA1P29973 690 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 SKIV2L2P42285 1042 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 KCNMA1Q12791 1236 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 C10orf76Q5T2E6 689 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 NEK8Q86SG6 692 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 KIAA0895Q8NCT3 520 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 FMO2Q99518 471 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 TSG101Q99816 390 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 SELENOSQ9BQE4 189 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 DDX47Q9H0S4 455 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 EPB41L4BQ9H329 900 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 CTNNAL1Q9UBT7 734 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 UTP11Q9Y3A2 253 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 ATP8B3O60423 1300 aa11.21□□□□□ -0.61
CHRNA1-202ENST00000348749 DPPA5A6NC42 116 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 PP2D1A8MPX8 630 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 SLC26A4O43511 780 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 GNAZP19086 355 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 TFAP4Q01664 338 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 PDIA5Q14554 519 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 LMNTD2Q8IXW0 634 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 LRRC57Q8N9N7 239 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 TMEM109Q9BVC6 243 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 RAB34Q9BZG1 259 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.62
CHRNA1-202ENST00000348749 A8MUI8 341 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 KRIT1O00522 736 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 ADAMTS3O15072 1205 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 SMIM24O75264 130 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 NOL4O94818 638 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 SUN1O94901 812 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 PLS1Q14651 629 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 TBC1D25Q3MII6 688 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 TNFAIP8L3Q5GJ75 292 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 ANO7Q6IWH7 933 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 HEATR3Q7Z4Q2 680 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 METTL13Q8N6R0 699 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 AP1M1Q9BXS5 423 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 PABPC3Q9H361 631 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 IL17RBQ9NRM6 502 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 AMACRQ9UHK6 382 aa11.2□□□□□ -0.62
CHRNA1-202ENST00000348749 A0A087X0T9 212 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TTI1O43156 1089 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GJB6O95452 261 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GNA14O95837 355 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 FAM228BP0C875 321 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 CCNB1P14635 433 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 HIBADHP31937 336 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GBP1P32455 592 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 FAM83BQ5T0W9 1011 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms