RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 CCDC194A0A1B0GVG4 234 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 CAND2O75155 1236 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 KRT2P35908 639 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 PRKCEQ02156 737 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 PKP1Q13835 747 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 FAM117BQ6P1L5 589 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 SMAP1Q8IYB5 467 aaPredicted RBP18.13■□□□□ 0.49
RAB5C-201ENST00000346213 KIAA0319LQ8IZA0 1049 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 SLC9A7Q96T83 725 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 TEKT3Q9BXF9 490 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 PCDHA2Q9Y5H9 948 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 MICAL3Q7RTP6 2002 aa18.13■□□□□ 0.49
RAB5C-201ENST00000346213 WDR81Q562E7 1941 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 WDR64B1ANS9 1081 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
RAB5C-201ENST00000346213 PSAPP07602 524 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 ACTN1P12814 892 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 PTMSP20962 102 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 MRPS6P82932 125 aaKnown RBP18.12■□□□□ 0.49
RAB5C-201ENST00000346213 TAP1Q03518 808 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 DRP2Q13474 957 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 PPP4R3AQ6IN85 833 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 TAF2Q6P1X5 1199 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 RRN3P2A6NIE6 340 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 HBP1O60381 514 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 BRD1O95696 1058 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 FAM160B1Q5W0V3 765 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 RTN4RL1Q86UN2 441 aaPredicted RBP18.12■□□□□ 0.49
RAB5C-201ENST00000346213 ZNF579Q8NAF0 562 aaKnown RBP18.12■□□□□ 0.49
RAB5C-201ENST00000346213 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
RAB5C-201ENST00000346213 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
RAB5C-201ENST00000346213 SMIM35A0A1B0GVV1 85 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 ABHD14A-ACY1A0A1B0GW23 586 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 GJB5O95377 273 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 BAG4O95429 457 aaKnown RBP18.11■□□□□ 0.49
RAB5C-201ENST00000346213 CD52P31358 61 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 SLC26A2P50443 739 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 CLCN3P51790 818 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 RAB30Q15771 203 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 LRRC71Q8N4P6 559 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 ZNF668Q96K58 619 aaPredicted RBP18.11■□□□□ 0.49
RAB5C-201ENST00000346213 IFIH1Q9BYX4 1025 aaKnown RBP18.11■□□□□ 0.49
RAB5C-201ENST00000346213 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 SMC3Q9UQE7 1217 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
RAB5C-201ENST00000346213 PARNO95453 639 aaKnown RBP18.1■□□□□ 0.49
RAB5C-201ENST00000346213 OATP04181 439 aa18.1■□□□□ 0.49
RAB5C-201ENST00000346213 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
RAB5C-201ENST00000346213 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
RAB5C-201ENST00000346213 PHOSPHO2Q8TCD6 241 aa18.1■□□□□ 0.49
RAB5C-201ENST00000346213 WASF1Q92558 559 aa18.1■□□□□ 0.49
RAB5C-201ENST00000346213 MSRAQ9UJ68 235 aa18.1■□□□□ 0.49
RAB5C-201ENST00000346213 COL4A4P53420 1690 aaPredicted RBP18.1■□□□□ 0.49
RAB5C-201ENST00000346213 ZBTB39O15060 712 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 MGEA5O60502 916 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 VTNP04004 478 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 IKBKEQ14164 716 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 PLA2G4FQ68DD2 849 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 MIER3Q7Z3K6 550 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 BBXQ8WY36 941 aaPredicted RBP18.09■□□□□ 0.49
RAB5C-201ENST00000346213 COL1A2P08123 1366 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 GPR32O75388 356 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 LINC00271P0C7V0 271 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 KCNJ6P48051 423 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 ANO5Q75V66 913 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 MYOCDQ8IZQ8 938 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 LLPHQ9BRT6 129 aaKnown RBP18.09■□□□□ 0.49
RAB5C-201ENST00000346213 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 PRDM6Q9NQX0 595 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 TRPV2Q9Y5S1 764 aa18.09■□□□□ 0.49
RAB5C-201ENST00000346213 GOLGA6L22H0YM25 854 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 TLL1O43897 1013 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 XBP1P17861 261 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 JAK3P52333 1124 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 KIZQ2M2Z5 673 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 ZNF484Q5JVG2 852 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 TSHZ1Q6ZSZ6 1077 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 FBXO18Q8NFZ0 1043 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 SEPT8Q92599 483 aa18.08■□□□□ 0.48
RAB5C-201ENST00000346213 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.48
RAB5C-201ENST00000346213 NOC2LQ9Y3T9 749 aaKnown RBP18.08■□□□□ 0.48
RAB5C-201ENST00000346213 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 LPXNO60711 386 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 FOSL2P15408 326 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 SFNP31947 248 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
RAB5C-201ENST00000346213 C8orf76Q96K31 380 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 MTMR9Q96QG7 549 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 RC3H2Q9HBD1 1191 aaKnown RBP18.07■□□□□ 0.48
RAB5C-201ENST00000346213 PADI3Q9ULW8 664 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms